Protein–RNA interactions for Protein: A0A0A6YXT2

Ighv1-36, Immunoglobulin heavy variable 1-36 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-36A0A0A6YXT2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Gm7290-201ENSMUST00000104990 617 ntBASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Gm12918-201ENSMUST00000120234 636 ntBASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Gm15710-201ENSMUST00000121821 636 ntBASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Gm26571-201ENSMUST00000181399 666 ntBASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Gm5075-201ENSMUST00000196916 622 ntBASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Gm6211-202ENSMUST00000167849 925 ntBASIC14.4□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.4□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.4□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-36A0A0A6YXT2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Gm18284-201ENSMUST00000172604 624 ntBASIC14.39□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.39□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Gm38285-201ENSMUST00000192928 922 ntBASIC14.39□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.38□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.38□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.38□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.38□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.38□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.38□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-36A0A0A6YXT2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.37□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.37□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-36A0A0A6YXT2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms