Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-43A0A0A6YXN5 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.4■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Gm12085-201ENSMUST00000119263 940 ntBASIC16.4■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-43A0A0A6YXN5 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.4■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.4■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.4■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-43A0A0A6YXN5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Gm13559-201ENSMUST00000120476 863 ntBASIC16.39■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Gm7977-201ENSMUST00000193787 748 ntBASIC16.39■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.39■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.39■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Gm13401-201ENSMUST00000117074 291 ntBASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Gm11539-201ENSMUST00000119837 557 ntBASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Gm13436-201ENSMUST00000120418 567 ntBASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Gm38027-201ENSMUST00000192315 235 ntBASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.37■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.37■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-43A0A0A6YXN5 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.37■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-43A0A0A6YXN5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms