Protein–RNA interactions for Protein: A0A0A6YX06

Trbv21, T cell receptor beta, variable 21 (Fragment), mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv21A0A0A6YX06 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv21A0A0A6YX06 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv21A0A0A6YX06 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv21A0A0A6YX06 Mir6349-201ENSMUST00000184059 97 ntBASIC16.46■□□□□ 0.23
Trbv21A0A0A6YX06 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv21A0A0A6YX06 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv21A0A0A6YX06 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv21A0A0A6YX06 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv21A0A0A6YX06 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trbv21A0A0A6YX06 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv21A0A0A6YX06 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv21A0A0A6YX06 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.46■□□□□ 0.23
Trbv21A0A0A6YX06 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv21A0A0A6YX06 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv21A0A0A6YX06 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv21A0A0A6YX06 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.46■□□□□ 0.22
Trbv21A0A0A6YX06 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.46■□□□□ 0.22
Trbv21A0A0A6YX06 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trbv21A0A0A6YX06 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trbv21A0A0A6YX06 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv21A0A0A6YX06 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trbv21A0A0A6YX06 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trbv21A0A0A6YX06 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv21A0A0A6YX06 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.45■□□□□ 0.22
Trbv21A0A0A6YX06 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.45■□□□□ 0.22
Trbv21A0A0A6YX06 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv21A0A0A6YX06 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv21A0A0A6YX06 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv21A0A0A6YX06 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Trbv21A0A0A6YX06 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv21A0A0A6YX06 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv21A0A0A6YX06 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trbv21A0A0A6YX06 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv21A0A0A6YX06 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv21A0A0A6YX06 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv21A0A0A6YX06 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv21A0A0A6YX06 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv21A0A0A6YX06 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv21A0A0A6YX06 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv21A0A0A6YX06 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv21A0A0A6YX06 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv21A0A0A6YX06 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv21A0A0A6YX06 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv21A0A0A6YX06 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv21A0A0A6YX06 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv21A0A0A6YX06 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv21A0A0A6YX06 Gm12896-201ENSMUST00000118430 226 ntBASIC16.44■□□□□ 0.22
Trbv21A0A0A6YX06 Gm10138-203ENSMUST00000206952 366 ntBASIC16.44■□□□□ 0.22
Trbv21A0A0A6YX06 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
Trbv21A0A0A6YX06 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv21A0A0A6YX06 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv21A0A0A6YX06 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv21A0A0A6YX06 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv21A0A0A6YX06 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv21A0A0A6YX06 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv21A0A0A6YX06 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
Trbv21A0A0A6YX06 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv21A0A0A6YX06 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trbv21A0A0A6YX06 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv21A0A0A6YX06 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv21A0A0A6YX06 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv21A0A0A6YX06 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv21A0A0A6YX06 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv21A0A0A6YX06 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv21A0A0A6YX06 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv21A0A0A6YX06 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv21A0A0A6YX06 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv21A0A0A6YX06 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv21A0A0A6YX06 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.43■□□□□ 0.22
Trbv21A0A0A6YX06 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv21A0A0A6YX06 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv21A0A0A6YX06 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv21A0A0A6YX06 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv21A0A0A6YX06 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv21A0A0A6YX06 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv21A0A0A6YX06 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Trbv21A0A0A6YX06 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.43■□□□□ 0.22
Trbv21A0A0A6YX06 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv21A0A0A6YX06 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.42■□□□□ 0.22
Trbv21A0A0A6YX06 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv21A0A0A6YX06 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trbv21A0A0A6YX06 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trbv21A0A0A6YX06 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv21A0A0A6YX06 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv21A0A0A6YX06 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trbv21A0A0A6YX06 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv21A0A0A6YX06 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv21A0A0A6YX06 Gm11249-201ENSMUST00000117071 859 ntBASIC16.42■□□□□ 0.22
Trbv21A0A0A6YX06 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv21A0A0A6YX06 Mir8112-201ENSMUST00000184382 131 ntBASIC16.42■□□□□ 0.22
Trbv21A0A0A6YX06 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv21A0A0A6YX06 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv21A0A0A6YX06 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv21A0A0A6YX06 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv21A0A0A6YX06 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv21A0A0A6YX06 Gm37744-201ENSMUST00000194616 1590 ntBASIC16.42■□□□□ 0.22
Trbv21A0A0A6YX06 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Trbv21A0A0A6YX06 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.42■□□□□ 0.22
Trbv21A0A0A6YX06 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv21A0A0A6YX06 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms