Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbc1A0A0A6YWV4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.3■□□□□ 0.2
Trbc1A0A0A6YWV4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trbc1A0A0A6YWV4 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.3■□□□□ 0.2
Trbc1A0A0A6YWV4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbc1A0A0A6YWV4 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Trbc1A0A0A6YWV4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbc1A0A0A6YWV4 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbc1A0A0A6YWV4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbc1A0A0A6YWV4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbc1A0A0A6YWV4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbc1A0A0A6YWV4 Gm13168-201ENSMUST00000121771 632 ntBASIC16.3■□□□□ 0.2
Trbc1A0A0A6YWV4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.3■□□□□ 0.2
Trbc1A0A0A6YWV4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbc1A0A0A6YWV4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbc1A0A0A6YWV4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbc1A0A0A6YWV4 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.3■□□□□ 0.2
Trbc1A0A0A6YWV4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbc1A0A0A6YWV4 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Trbc1A0A0A6YWV4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbc1A0A0A6YWV4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbc1A0A0A6YWV4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Gm13158-201ENSMUST00000122007 736 ntBASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Gm18666-201ENSMUST00000190039 958 ntBASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbc1A0A0A6YWV4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbc1A0A0A6YWV4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbc1A0A0A6YWV4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.28■□□□□ 0.2
Trbc1A0A0A6YWV4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trbc1A0A0A6YWV4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbc1A0A0A6YWV4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbc1A0A0A6YWV4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.28■□□□□ 0.2
Trbc1A0A0A6YWV4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trbc1A0A0A6YWV4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trbc1A0A0A6YWV4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbc1A0A0A6YWV4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbc1A0A0A6YWV4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbc1A0A0A6YWV4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbc1A0A0A6YWV4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbc1A0A0A6YWV4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbc1A0A0A6YWV4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.27■□□□□ 0.2
Trbc1A0A0A6YWV4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.27■□□□□ 0.2
Trbc1A0A0A6YWV4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbc1A0A0A6YWV4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbc1A0A0A6YWV4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbc1A0A0A6YWV4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.27■□□□□ 0.2
Trbc1A0A0A6YWV4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbc1A0A0A6YWV4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbc1A0A0A6YWV4 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbc1A0A0A6YWV4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbc1A0A0A6YWV4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.27■□□□□ 0.2
Trbc1A0A0A6YWV4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbc1A0A0A6YWV4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Trbc1A0A0A6YWV4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbc1A0A0A6YWV4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbc1A0A0A6YWV4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbc1A0A0A6YWV4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbc1A0A0A6YWV4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbc1A0A0A6YWV4 Gm22240-201ENSMUST00000175225 82 ntBASIC16.26■□□□□ 0.19
Trbc1A0A0A6YWV4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Trbc1A0A0A6YWV4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbc1A0A0A6YWV4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbc1A0A0A6YWV4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbc1A0A0A6YWV4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbc1A0A0A6YWV4 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.26■□□□□ 0.19
Trbc1A0A0A6YWV4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbc1A0A0A6YWV4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbc1A0A0A6YWV4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbc1A0A0A6YWV4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.26■□□□□ 0.19
Trbc1A0A0A6YWV4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms