Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28778A0A087WSK7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Gm28778A0A087WSK7 Gm8520-201ENSMUST00000186517 868 ntBASIC14.42□□□□□ -0.1
Gm28778A0A087WSK7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28778A0A087WSK7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28778A0A087WSK7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28778A0A087WSK7 Idnk-204ENSMUST00000226010 1898 ntBASIC14.42□□□□□ -0.1
Gm28778A0A087WSK7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Gm28778A0A087WSK7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28778A0A087WSK7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28778A0A087WSK7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28778A0A087WSK7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28778A0A087WSK7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28778A0A087WSK7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28778A0A087WSK7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28778A0A087WSK7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28778A0A087WSK7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Gm28778A0A087WSK7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28778A0A087WSK7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Gm28778A0A087WSK7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28778A0A087WSK7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.41□□□□□ -0.1
Gm28778A0A087WSK7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.41□□□□□ -0.1
Gm28778A0A087WSK7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28778A0A087WSK7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Gm28778A0A087WSK7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.41□□□□□ -0.1
Gm28778A0A087WSK7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28778A0A087WSK7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28778A0A087WSK7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28778A0A087WSK7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28778A0A087WSK7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28778A0A087WSK7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28778A0A087WSK7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm28778A0A087WSK7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28778A0A087WSK7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28778A0A087WSK7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28778A0A087WSK7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.4□□□□□ -0.1
Gm28778A0A087WSK7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28778A0A087WSK7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.4□□□□□ -0.1
Gm28778A0A087WSK7 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.4□□□□□ -0.1
Gm28778A0A087WSK7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.4□□□□□ -0.1
Gm28778A0A087WSK7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.4□□□□□ -0.1
Gm28778A0A087WSK7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Gm28778A0A087WSK7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28778A0A087WSK7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28778A0A087WSK7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28778A0A087WSK7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28778A0A087WSK7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm28778A0A087WSK7 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.39□□□□□ -0.11
Gm28778A0A087WSK7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28778A0A087WSK7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28778A0A087WSK7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28778A0A087WSK7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28778A0A087WSK7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28778A0A087WSK7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28778A0A087WSK7 Gm15378-201ENSMUST00000121894 207 ntBASIC14.39□□□□□ -0.11
Gm28778A0A087WSK7 Gm42545-201ENSMUST00000202755 922 ntBASIC14.39□□□□□ -0.11
Gm28778A0A087WSK7 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.39□□□□□ -0.11
Gm28778A0A087WSK7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28778A0A087WSK7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28778A0A087WSK7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.39□□□□□ -0.11
Gm28778A0A087WSK7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
Gm28778A0A087WSK7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28778A0A087WSK7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28778A0A087WSK7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28778A0A087WSK7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28778A0A087WSK7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28778A0A087WSK7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm28778A0A087WSK7 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.39□□□□□ -0.11
Gm28778A0A087WSK7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 Gm10698-201ENSMUST00000182663 604 ntBASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.38□□□□□ -0.11
Gm28778A0A087WSK7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm28778A0A087WSK7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm28778A0A087WSK7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm28778A0A087WSK7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm28778A0A087WSK7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms