Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-4A0A075B6B4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-4A0A075B6B4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-4A0A075B6B4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-4A0A075B6B4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-4A0A075B6B4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-4A0A075B6B4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-4A0A075B6B4 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-4A0A075B6B4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.68□□□□□ -0.22
Trav6-4A0A075B6B4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-4A0A075B6B4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-4A0A075B6B4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav6-4A0A075B6B4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav6-4A0A075B6B4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-4A0A075B6B4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-4A0A075B6B4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-4A0A075B6B4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-4A0A075B6B4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6-4A0A075B6B4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-4A0A075B6B4 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-4A0A075B6B4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-4A0A075B6B4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-4A0A075B6B4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-4A0A075B6B4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-4A0A075B6B4 Gm11249-201ENSMUST00000117071 859 ntBASIC13.67□□□□□ -0.22
Trav6-4A0A075B6B4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.67□□□□□ -0.22
Trav6-4A0A075B6B4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-4A0A075B6B4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-4A0A075B6B4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-4A0A075B6B4 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.67□□□□□ -0.22
Trav6-4A0A075B6B4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-4A0A075B6B4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-4A0A075B6B4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-4A0A075B6B4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-4A0A075B6B4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-4A0A075B6B4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-4A0A075B6B4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-4A0A075B6B4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-4A0A075B6B4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6-4A0A075B6B4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
Trav6-4A0A075B6B4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-4A0A075B6B4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav6-4A0A075B6B4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav6-4A0A075B6B4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-4A0A075B6B4 Gm12527-201ENSMUST00000117967 564 ntBASIC13.66□□□□□ -0.22
Trav6-4A0A075B6B4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-4A0A075B6B4 Gm27275-201ENSMUST00000184318 272 ntBASIC13.66□□□□□ -0.22
Trav6-4A0A075B6B4 Trmt13-210ENSMUST00000198454 880 ntBASIC13.66□□□□□ -0.22
Trav6-4A0A075B6B4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-4A0A075B6B4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-4A0A075B6B4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-4A0A075B6B4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-4A0A075B6B4 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.66□□□□□ -0.22
Trav6-4A0A075B6B4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-4A0A075B6B4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav6-4A0A075B6B4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-4A0A075B6B4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-4A0A075B6B4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-4A0A075B6B4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Gm13158-201ENSMUST00000122007 736 ntBASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Gm37856-201ENSMUST00000191634 999 ntBASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Gm10138-203ENSMUST00000206952 366 ntBASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.65□□□□□ -0.22
Trav6-4A0A075B6B4 Mtag2-201ENSMUST00000058665 714 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms