Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-7A0A075B6B0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-7A0A075B6B0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-7A0A075B6B0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-7A0A075B6B0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-7A0A075B6B0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-7A0A075B6B0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.73□□□□□ -0.21
Trav6d-7A0A075B6B0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-7A0A075B6B0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav6d-7A0A075B6B0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
Trav6d-7A0A075B6B0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.73□□□□□ -0.21
Trav6d-7A0A075B6B0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav6d-7A0A075B6B0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-7A0A075B6B0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-7A0A075B6B0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-7A0A075B6B0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-7A0A075B6B0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.73□□□□□ -0.21
Trav6d-7A0A075B6B0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-7A0A075B6B0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-7A0A075B6B0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-7A0A075B6B0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-7A0A075B6B0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-7A0A075B6B0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-7A0A075B6B0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-7A0A075B6B0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-7A0A075B6B0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-7A0A075B6B0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-7A0A075B6B0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-7A0A075B6B0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-7A0A075B6B0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Trav6d-7A0A075B6B0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-7A0A075B6B0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Trav6d-7A0A075B6B0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-7A0A075B6B0 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.72□□□□□ -0.21
Trav6d-7A0A075B6B0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav6d-7A0A075B6B0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav6d-7A0A075B6B0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-7A0A075B6B0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-7A0A075B6B0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-7A0A075B6B0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-7A0A075B6B0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-7A0A075B6B0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-7A0A075B6B0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-7A0A075B6B0 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.71□□□□□ -0.21
Trav6d-7A0A075B6B0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-7A0A075B6B0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
Trav6d-7A0A075B6B0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-7A0A075B6B0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-7A0A075B6B0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-7A0A075B6B0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-7A0A075B6B0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-7A0A075B6B0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav6d-7A0A075B6B0 Gm12441-201ENSMUST00000121806 588 ntBASIC13.71□□□□□ -0.21
Trav6d-7A0A075B6B0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-7A0A075B6B0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.71□□□□□ -0.21
Trav6d-7A0A075B6B0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-7A0A075B6B0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav6d-7A0A075B6B0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-7A0A075B6B0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trav6d-7A0A075B6B0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.71□□□□□ -0.22
Trav6d-7A0A075B6B0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6d-7A0A075B6B0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6d-7A0A075B6B0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6d-7A0A075B6B0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6d-7A0A075B6B0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-7A0A075B6B0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-7A0A075B6B0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-7A0A075B6B0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-7A0A075B6B0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-7A0A075B6B0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-7A0A075B6B0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav6d-7A0A075B6B0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-7A0A075B6B0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-7A0A075B6B0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.7□□□□□ -0.22
Trav6d-7A0A075B6B0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Trav6d-7A0A075B6B0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-7A0A075B6B0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-7A0A075B6B0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-7A0A075B6B0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-7A0A075B6B0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-7A0A075B6B0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Trav6d-7A0A075B6B0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-7A0A075B6B0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-7A0A075B6B0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-7A0A075B6B0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-7A0A075B6B0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-7A0A075B6B0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-7A0A075B6B0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-7A0A075B6B0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-7A0A075B6B0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-7A0A075B6B0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav6d-7A0A075B6B0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav6d-7A0A075B6B0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-7A0A075B6B0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav6d-7A0A075B6B0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.69□□□□□ -0.22
Trav6d-7A0A075B6B0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-7A0A075B6B0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Trav6d-7A0A075B6B0 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.69□□□□□ -0.22
Trav6d-7A0A075B6B0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trav6d-7A0A075B6B0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms