Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-3A0A075B695 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav9d-3A0A075B695 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-3A0A075B695 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-3A0A075B695 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav9d-3A0A075B695 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav9d-3A0A075B695 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav9d-3A0A075B695 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-3A0A075B695 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-3A0A075B695 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Trav9d-3A0A075B695 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav9d-3A0A075B695 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-3A0A075B695 Gm27405-201ENSMUST00000184201 112 ntBASIC12.69□□□□□ -0.38
Trav9d-3A0A075B695 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-3A0A075B695 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-3A0A075B695 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-3A0A075B695 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-3A0A075B695 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-3A0A075B695 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav9d-3A0A075B695 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-3A0A075B695 Tgds-204ENSMUST00000228543 1594 ntBASIC12.69□□□□□ -0.38
Trav9d-3A0A075B695 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav9d-3A0A075B695 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-3A0A075B695 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-3A0A075B695 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-3A0A075B695 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-3A0A075B695 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-3A0A075B695 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-3A0A075B695 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-3A0A075B695 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav9d-3A0A075B695 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-3A0A075B695 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav9d-3A0A075B695 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-3A0A075B695 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12.68□□□□□ -0.38
Trav9d-3A0A075B695 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav9d-3A0A075B695 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav9d-3A0A075B695 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trav9d-3A0A075B695 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-3A0A075B695 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-3A0A075B695 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav9d-3A0A075B695 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-3A0A075B695 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-3A0A075B695 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav9d-3A0A075B695 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-3A0A075B695 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-3A0A075B695 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-3A0A075B695 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav9d-3A0A075B695 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC12.67□□□□□ -0.38
Trav9d-3A0A075B695 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trav9d-3A0A075B695 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Trav9d-3A0A075B695 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav9d-3A0A075B695 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav9d-3A0A075B695 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-3A0A075B695 Gm6211-202ENSMUST00000167849 925 ntBASIC12.67□□□□□ -0.38
Trav9d-3A0A075B695 Gm7291-201ENSMUST00000199147 382 ntBASIC12.67□□□□□ -0.38
Trav9d-3A0A075B695 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-3A0A075B695 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Trav9d-3A0A075B695 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.67□□□□□ -0.38
Trav9d-3A0A075B695 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-3A0A075B695 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-3A0A075B695 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav9d-3A0A075B695 Gm37563-201ENSMUST00000192580 1513 ntBASIC12.67□□□□□ -0.38
Trav9d-3A0A075B695 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav9d-3A0A075B695 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-3A0A075B695 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Gm7290-201ENSMUST00000104990 617 ntBASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Gm12918-201ENSMUST00000120234 636 ntBASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Gm15710-201ENSMUST00000121821 636 ntBASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Gm5075-201ENSMUST00000196916 622 ntBASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-3A0A075B695 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-3A0A075B695 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-3A0A075B695 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-3A0A075B695 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-3A0A075B695 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-3A0A075B695 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-3A0A075B695 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms