Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9n-4A0A075B631 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9n-4A0A075B631 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9n-4A0A075B631 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9n-4A0A075B631 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav9n-4A0A075B631 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9n-4A0A075B631 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9n-4A0A075B631 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9n-4A0A075B631 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav9n-4A0A075B631 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
Trav9n-4A0A075B631 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9n-4A0A075B631 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav9n-4A0A075B631 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9n-4A0A075B631 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9n-4A0A075B631 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav9n-4A0A075B631 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9n-4A0A075B631 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9n-4A0A075B631 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9n-4A0A075B631 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav9n-4A0A075B631 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9n-4A0A075B631 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9n-4A0A075B631 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9n-4A0A075B631 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav9n-4A0A075B631 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9n-4A0A075B631 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9n-4A0A075B631 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9n-4A0A075B631 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9n-4A0A075B631 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9n-4A0A075B631 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.16□□□□□ -0.46
Trav9n-4A0A075B631 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9n-4A0A075B631 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9n-4A0A075B631 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav9n-4A0A075B631 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Trav9n-4A0A075B631 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9n-4A0A075B631 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav9n-4A0A075B631 Gm7514-201ENSMUST00000209475 934 ntBASIC12.16□□□□□ -0.46
Trav9n-4A0A075B631 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav9n-4A0A075B631 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav9n-4A0A075B631 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9n-4A0A075B631 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9n-4A0A075B631 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9n-4A0A075B631 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9n-4A0A075B631 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav9n-4A0A075B631 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9n-4A0A075B631 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9n-4A0A075B631 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9n-4A0A075B631 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav9n-4A0A075B631 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9n-4A0A075B631 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9n-4A0A075B631 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9n-4A0A075B631 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9n-4A0A075B631 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav9n-4A0A075B631 Gm22325-201ENSMUST00000158904 308 ntBASIC12.15□□□□□ -0.46
Trav9n-4A0A075B631 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav9n-4A0A075B631 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9n-4A0A075B631 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Trav9n-4A0A075B631 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
Trav9n-4A0A075B631 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav9n-4A0A075B631 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Trav9n-4A0A075B631 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9n-4A0A075B631 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9n-4A0A075B631 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9n-4A0A075B631 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav9n-4A0A075B631 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav9n-4A0A075B631 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9n-4A0A075B631 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9n-4A0A075B631 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trav9n-4A0A075B631 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav9n-4A0A075B631 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Gm43672-201ENSMUST00000199072 1731 ntBASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9n-4A0A075B631 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms