Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC12.12□□□□□ -0.47
Trav4d-3A0A075B625 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4d-3A0A075B625 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4d-3A0A075B625 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4d-3A0A075B625 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4d-3A0A075B625 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4d-3A0A075B625 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4d-3A0A075B625 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4d-3A0A075B625 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4d-3A0A075B625 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4d-3A0A075B625 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4d-3A0A075B625 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4d-3A0A075B625 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4d-3A0A075B625 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4d-3A0A075B625 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4d-3A0A075B625 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4d-3A0A075B625 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Trav4d-3A0A075B625 AC107452.1-201ENSMUST00000227963 481 ntBASIC12.11□□□□□ -0.47
Trav4d-3A0A075B625 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4d-3A0A075B625 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav4d-3A0A075B625 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.11□□□□□ -0.47
Trav4d-3A0A075B625 Dancr-204ENSMUST00000132389 2347 ntBASIC12.11□□□□□ -0.47
Trav4d-3A0A075B625 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4d-3A0A075B625 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4d-3A0A075B625 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4d-3A0A075B625 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4d-3A0A075B625 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4d-3A0A075B625 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4d-3A0A075B625 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav4d-3A0A075B625 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4d-3A0A075B625 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 Gm7860-201ENSMUST00000121190 879 ntBASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4d-3A0A075B625 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4d-3A0A075B625 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4d-3A0A075B625 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4d-3A0A075B625 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4d-3A0A075B625 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4d-3A0A075B625 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4d-3A0A075B625 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4d-3A0A075B625 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4d-3A0A075B625 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4d-3A0A075B625 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.08□□□□□ -0.48
Trav4d-3A0A075B625 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav4d-3A0A075B625 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC12.08□□□□□ -0.48
Trav4d-3A0A075B625 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav4d-3A0A075B625 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms