Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav6-1A0A075B5Z8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-1A0A075B5Z8 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.31□□□□□ -0.12
Trav6-1A0A075B5Z8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-1A0A075B5Z8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-1A0A075B5Z8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-1A0A075B5Z8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-1A0A075B5Z8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-1A0A075B5Z8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-1A0A075B5Z8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-1A0A075B5Z8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.31□□□□□ -0.12
Trav6-1A0A075B5Z8 Gm13234-201ENSMUST00000120010 747 ntBASIC14.31□□□□□ -0.12
Trav6-1A0A075B5Z8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.31□□□□□ -0.12
Trav6-1A0A075B5Z8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.31□□□□□ -0.12
Trav6-1A0A075B5Z8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.31□□□□□ -0.12
Trav6-1A0A075B5Z8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav6-1A0A075B5Z8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav6-1A0A075B5Z8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-1A0A075B5Z8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.31□□□□□ -0.12
Trav6-1A0A075B5Z8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-1A0A075B5Z8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.31□□□□□ -0.12
Trav6-1A0A075B5Z8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-1A0A075B5Z8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.31□□□□□ -0.12
Trav6-1A0A075B5Z8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-1A0A075B5Z8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-1A0A075B5Z8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-1A0A075B5Z8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-1A0A075B5Z8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-1A0A075B5Z8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-1A0A075B5Z8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-1A0A075B5Z8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-1A0A075B5Z8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-1A0A075B5Z8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav6-1A0A075B5Z8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Trav6-1A0A075B5Z8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trav6-1A0A075B5Z8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-1A0A075B5Z8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-1A0A075B5Z8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-1A0A075B5Z8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-1A0A075B5Z8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trav6-1A0A075B5Z8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-1A0A075B5Z8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-1A0A075B5Z8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-1A0A075B5Z8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-1A0A075B5Z8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav6-1A0A075B5Z8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-1A0A075B5Z8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-1A0A075B5Z8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav6-1A0A075B5Z8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-1A0A075B5Z8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-1A0A075B5Z8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-1A0A075B5Z8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-1A0A075B5Z8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-1A0A075B5Z8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.29□□□□□ -0.12
Trav6-1A0A075B5Z8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-1A0A075B5Z8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-1A0A075B5Z8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav6-1A0A075B5Z8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-1A0A075B5Z8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-1A0A075B5Z8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-1A0A075B5Z8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-1A0A075B5Z8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-1A0A075B5Z8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-1A0A075B5Z8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-1A0A075B5Z8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav6-1A0A075B5Z8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Trav6-1A0A075B5Z8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-1A0A075B5Z8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trav6-1A0A075B5Z8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav6-1A0A075B5Z8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Trav6-1A0A075B5Z8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav6-1A0A075B5Z8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-1A0A075B5Z8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav6-1A0A075B5Z8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav6-1A0A075B5Z8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms