Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smco4Q9JIS3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smco4Q9JIS3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smco4Q9JIS3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Smco4Q9JIS3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smco4Q9JIS3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smco4Q9JIS3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.5■□□□□ 0.71
Smco4Q9JIS3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smco4Q9JIS3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smco4Q9JIS3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smco4Q9JIS3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smco4Q9JIS3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smco4Q9JIS3 Gm27325-201ENSMUST00000175467 74 ntBASIC19.48■□□□□ 0.71
Smco4Q9JIS3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smco4Q9JIS3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smco4Q9JIS3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smco4Q9JIS3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smco4Q9JIS3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smco4Q9JIS3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smco4Q9JIS3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smco4Q9JIS3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Smco4Q9JIS3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.46■□□□□ 0.71
Smco4Q9JIS3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smco4Q9JIS3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smco4Q9JIS3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Smco4Q9JIS3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smco4Q9JIS3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smco4Q9JIS3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.44■□□□□ 0.7
Smco4Q9JIS3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smco4Q9JIS3 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.44■□□□□ 0.7
Smco4Q9JIS3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smco4Q9JIS3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smco4Q9JIS3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Smco4Q9JIS3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smco4Q9JIS3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smco4Q9JIS3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smco4Q9JIS3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco4Q9JIS3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco4Q9JIS3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco4Q9JIS3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Smco4Q9JIS3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco4Q9JIS3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smco4Q9JIS3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smco4Q9JIS3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smco4Q9JIS3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smco4Q9JIS3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.4■□□□□ 0.7
Smco4Q9JIS3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smco4Q9JIS3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Smco4Q9JIS3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Smco4Q9JIS3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Smco4Q9JIS3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smco4Q9JIS3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smco4Q9JIS3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smco4Q9JIS3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smco4Q9JIS3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.37■□□□□ 0.69
Smco4Q9JIS3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smco4Q9JIS3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smco4Q9JIS3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smco4Q9JIS3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smco4Q9JIS3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smco4Q9JIS3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smco4Q9JIS3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Smco4Q9JIS3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smco4Q9JIS3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smco4Q9JIS3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Smco4Q9JIS3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.68
Smco4Q9JIS3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smco4Q9JIS3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Smco4Q9JIS3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Smco4Q9JIS3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.32■□□□□ 0.68
Smco4Q9JIS3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smco4Q9JIS3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.32■□□□□ 0.68
Smco4Q9JIS3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smco4Q9JIS3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smco4Q9JIS3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Smco4Q9JIS3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smco4Q9JIS3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smco4Q9JIS3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smco4Q9JIS3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Smco4Q9JIS3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smco4Q9JIS3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smco4Q9JIS3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.3■□□□□ 0.68
Smco4Q9JIS3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smco4Q9JIS3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smco4Q9JIS3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smco4Q9JIS3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smco4Q9JIS3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smco4Q9JIS3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smco4Q9JIS3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smco4Q9JIS3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smco4Q9JIS3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smco4Q9JIS3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smco4Q9JIS3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smco4Q9JIS3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smco4Q9JIS3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Smco4Q9JIS3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smco4Q9JIS3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Smco4Q9JIS3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.26■□□□□ 0.67
Smco4Q9JIS3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Smco4Q9JIS3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 9 ms