Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm27322-201ENSMUST00000184007 104 ntBASIC23.08■■□□□ 1.29
Ube4bQ9ES00 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ube4bQ9ES00 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Ube4bQ9ES00 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Ube4bQ9ES00 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ube4bQ9ES00 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Ube4bQ9ES00 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ube4bQ9ES00 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ube4bQ9ES00 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ube4bQ9ES00 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ube4bQ9ES00 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ube4bQ9ES00 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.03■■□□□ 1.28
Ube4bQ9ES00 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
Ube4bQ9ES00 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Ube4bQ9ES00 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Ube4bQ9ES00 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ube4bQ9ES00 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Ube4bQ9ES00 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ube4bQ9ES00 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ube4bQ9ES00 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23■■□□□ 1.27
Ube4bQ9ES00 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Ube4bQ9ES00 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ube4bQ9ES00 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.98■■□□□ 1.27
Ube4bQ9ES00 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ube4bQ9ES00 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ube4bQ9ES00 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ube4bQ9ES00 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.98■■□□□ 1.27
Ube4bQ9ES00 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ube4bQ9ES00 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ube4bQ9ES00 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ube4bQ9ES00 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ube4bQ9ES00 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.95■■□□□ 1.26
Ube4bQ9ES00 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.95■■□□□ 1.26
Ube4bQ9ES00 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ube4bQ9ES00 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Ube4bQ9ES00 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ube4bQ9ES00 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ube4bQ9ES00 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ube4bQ9ES00 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Ube4bQ9ES00 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ube4bQ9ES00 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ube4bQ9ES00 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.91■■□□□ 1.26
Ube4bQ9ES00 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Ube4bQ9ES00 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ube4bQ9ES00 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Ube4bQ9ES00 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Ube4bQ9ES00 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ube4bQ9ES00 Gm26115-201ENSMUST00000175605 87 ntBASIC22.9■■□□□ 1.26
Ube4bQ9ES00 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Ube4bQ9ES00 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Ube4bQ9ES00 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.89■■□□□ 1.26
Ube4bQ9ES00 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Ube4bQ9ES00 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ube4bQ9ES00 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ube4bQ9ES00 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ube4bQ9ES00 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.88■■□□□ 1.25
Ube4bQ9ES00 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Ube4bQ9ES00 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Ube4bQ9ES00 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ube4bQ9ES00 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Ube4bQ9ES00 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ube4bQ9ES00 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ube4bQ9ES00 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ube4bQ9ES00 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Ube4bQ9ES00 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ube4bQ9ES00 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ube4bQ9ES00 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ube4bQ9ES00 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.85■■□□□ 1.25
Ube4bQ9ES00 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Ube4bQ9ES00 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ube4bQ9ES00 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.84■■□□□ 1.25
Ube4bQ9ES00 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ube4bQ9ES00 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Ube4bQ9ES00 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ube4bQ9ES00 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
Ube4bQ9ES00 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ube4bQ9ES00 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Ube4bQ9ES00 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ube4bQ9ES00 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.82■■□□□ 1.24
Ube4bQ9ES00 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ube4bQ9ES00 Gm8109-201ENSMUST00000194076 746 ntBASIC22.81■■□□□ 1.24
Ube4bQ9ES00 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Ube4bQ9ES00 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Ube4bQ9ES00 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.79■■□□□ 1.24
Ube4bQ9ES00 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ube4bQ9ES00 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ube4bQ9ES00 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ube4bQ9ES00 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Ube4bQ9ES00 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ube4bQ9ES00 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ube4bQ9ES00 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ube4bQ9ES00 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.78■■□□□ 1.24
Ube4bQ9ES00 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Ube4bQ9ES00 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Ube4bQ9ES00 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ube4bQ9ES00 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Ube4bQ9ES00 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Ube4bQ9ES00 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Ube4bQ9ES00 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ube4bQ9ES00 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms