Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ssx2ipQ8VC66 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.63■■□□□ 1.53
Ssx2ipQ8VC66 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Ssx2ipQ8VC66 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.62■■□□□ 1.53
Ssx2ipQ8VC66 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Ssx2ipQ8VC66 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ssx2ipQ8VC66 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ssx2ipQ8VC66 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ssx2ipQ8VC66 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.6■■□□□ 1.53
Ssx2ipQ8VC66 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ssx2ipQ8VC66 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.59■■□□□ 1.53
Ssx2ipQ8VC66 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.59■■□□□ 1.53
Ssx2ipQ8VC66 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ssx2ipQ8VC66 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.58■■□□□ 1.53
Ssx2ipQ8VC66 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Ssx2ipQ8VC66 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.57■■□□□ 1.52
Ssx2ipQ8VC66 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ssx2ipQ8VC66 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ssx2ipQ8VC66 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ssx2ipQ8VC66 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ssx2ipQ8VC66 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Ssx2ipQ8VC66 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ssx2ipQ8VC66 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Ssx2ipQ8VC66 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.53■■□□□ 1.52
Ssx2ipQ8VC66 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ssx2ipQ8VC66 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ssx2ipQ8VC66 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ssx2ipQ8VC66 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.5■■□□□ 1.51
Ssx2ipQ8VC66 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Ssx2ipQ8VC66 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ssx2ipQ8VC66 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Ssx2ipQ8VC66 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC24.49■■□□□ 1.51
Ssx2ipQ8VC66 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
Ssx2ipQ8VC66 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.49■■□□□ 1.51
Ssx2ipQ8VC66 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ssx2ipQ8VC66 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Ssx2ipQ8VC66 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ssx2ipQ8VC66 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ssx2ipQ8VC66 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Ssx2ipQ8VC66 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.47■■□□□ 1.51
Ssx2ipQ8VC66 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ssx2ipQ8VC66 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ssx2ipQ8VC66 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
Ssx2ipQ8VC66 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.46■■□□□ 1.51
Ssx2ipQ8VC66 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Ssx2ipQ8VC66 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ssx2ipQ8VC66 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ssx2ipQ8VC66 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Ssx2ipQ8VC66 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ssx2ipQ8VC66 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ssx2ipQ8VC66 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ssx2ipQ8VC66 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ssx2ipQ8VC66 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.43■■□□□ 1.5
Ssx2ipQ8VC66 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.42■■□□□ 1.5
Ssx2ipQ8VC66 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ssx2ipQ8VC66 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Ssx2ipQ8VC66 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.4■■□□□ 1.5
Ssx2ipQ8VC66 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.39■■□□□ 1.5
Ssx2ipQ8VC66 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ssx2ipQ8VC66 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ssx2ipQ8VC66 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.39■■□□□ 1.49
Ssx2ipQ8VC66 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ssx2ipQ8VC66 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ssx2ipQ8VC66 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.38■■□□□ 1.49
Ssx2ipQ8VC66 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ssx2ipQ8VC66 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.38■■□□□ 1.49
Ssx2ipQ8VC66 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ssx2ipQ8VC66 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Ssx2ipQ8VC66 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ssx2ipQ8VC66 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ssx2ipQ8VC66 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.37■■□□□ 1.49
Ssx2ipQ8VC66 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ssx2ipQ8VC66 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ssx2ipQ8VC66 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ssx2ipQ8VC66 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ssx2ipQ8VC66 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.33■■□□□ 1.49
Ssx2ipQ8VC66 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Ssx2ipQ8VC66 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC24.33■■□□□ 1.49
Ssx2ipQ8VC66 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ssx2ipQ8VC66 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.33■■□□□ 1.49
Ssx2ipQ8VC66 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ssx2ipQ8VC66 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.48
Ssx2ipQ8VC66 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Ssx2ipQ8VC66 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ssx2ipQ8VC66 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.31■■□□□ 1.48
Ssx2ipQ8VC66 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ssx2ipQ8VC66 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ssx2ipQ8VC66 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ssx2ipQ8VC66 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ssx2ipQ8VC66 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Ssx2ipQ8VC66 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Ssx2ipQ8VC66 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ssx2ipQ8VC66 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.26■■□□□ 1.47
Ssx2ipQ8VC66 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC24.26■■□□□ 1.47
Ssx2ipQ8VC66 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Ssx2ipQ8VC66 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ssx2ipQ8VC66 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ssx2ipQ8VC66 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.24■■□□□ 1.47
Ssx2ipQ8VC66 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ssx2ipQ8VC66 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms