Protein–RNA interactions for Protein: Q8R043

Smim29, Uncharacterized protein SMIM29, mousemouse

Predictions only

Length 75 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim29Q8R043 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC15.42■□□□□ 0.06
Smim29Q8R043 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Smim29Q8R043 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smim29Q8R043 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Smim29Q8R043 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Smim29Q8R043 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smim29Q8R043 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smim29Q8R043 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smim29Q8R043 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Smim29Q8R043 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Smim29Q8R043 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smim29Q8R043 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smim29Q8R043 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC15.39■□□□□ 0.05
Smim29Q8R043 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smim29Q8R043 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smim29Q8R043 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smim29Q8R043 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Smim29Q8R043 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smim29Q8R043 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smim29Q8R043 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smim29Q8R043 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smim29Q8R043 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smim29Q8R043 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smim29Q8R043 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smim29Q8R043 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Smim29Q8R043 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smim29Q8R043 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smim29Q8R043 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smim29Q8R043 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
Smim29Q8R043 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smim29Q8R043 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Smim29Q8R043 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smim29Q8R043 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Smim29Q8R043 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smim29Q8R043 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Smim29Q8R043 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smim29Q8R043 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smim29Q8R043 Pcf11-205ENSMUST00000208255 1720 ntBASIC15.33■□□□□ 0.04
Smim29Q8R043 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Smim29Q8R043 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC15.33■□□□□ 0.04
Smim29Q8R043 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim29Q8R043 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim29Q8R043 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim29Q8R043 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim29Q8R043 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim29Q8R043 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smim29Q8R043 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim29Q8R043 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smim29Q8R043 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Smim29Q8R043 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim29Q8R043 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smim29Q8R043 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim29Q8R043 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim29Q8R043 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim29Q8R043 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim29Q8R043 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim29Q8R043 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smim29Q8R043 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Smim29Q8R043 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smim29Q8R043 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim29Q8R043 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smim29Q8R043 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smim29Q8R043 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smim29Q8R043 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Smim29Q8R043 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC15.26■□□□□ 0.03
Smim29Q8R043 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smim29Q8R043 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smim29Q8R043 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smim29Q8R043 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smim29Q8R043 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC15.25■□□□□ 0.03
Smim29Q8R043 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smim29Q8R043 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smim29Q8R043 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC15.25■□□□□ 0.03
Smim29Q8R043 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Smim29Q8R043 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC15.25■□□□□ 0.03
Smim29Q8R043 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim29Q8R043 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC15.24■□□□□ 0.03
Smim29Q8R043 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim29Q8R043 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smim29Q8R043 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim29Q8R043 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim29Q8R043 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim29Q8R043 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Smim29Q8R043 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Smim29Q8R043 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smim29Q8R043 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Smim29Q8R043 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smim29Q8R043 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smim29Q8R043 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim29Q8R043 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim29Q8R043 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim29Q8R043 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim29Q8R043 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Smim29Q8R043 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC15.19■□□□□ 0.02
Smim29Q8R043 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smim29Q8R043 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim29Q8R043 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim29Q8R043 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim29Q8R043 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim29Q8R043 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms