Protein–RNA interactions for Protein: Q8K3G5

Vrk3, Inactive serine/threonine-protein kinase VRK3, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk3Q8K3G5 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vrk3Q8K3G5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vrk3Q8K3G5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vrk3Q8K3G5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vrk3Q8K3G5 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vrk3Q8K3G5 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vrk3Q8K3G5 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Vrk3Q8K3G5 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.4■□□□□ 0.86
Vrk3Q8K3G5 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vrk3Q8K3G5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Vrk3Q8K3G5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vrk3Q8K3G5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vrk3Q8K3G5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vrk3Q8K3G5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Vrk3Q8K3G5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vrk3Q8K3G5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Vrk3Q8K3G5 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vrk3Q8K3G5 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vrk3Q8K3G5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vrk3Q8K3G5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.35■□□□□ 0.85
Vrk3Q8K3G5 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vrk3Q8K3G5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vrk3Q8K3G5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vrk3Q8K3G5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vrk3Q8K3G5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Vrk3Q8K3G5 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vrk3Q8K3G5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.34■□□□□ 0.85
Vrk3Q8K3G5 Zfp131-205ENSMUST00000223812 663 ntBASIC20.34■□□□□ 0.85
Vrk3Q8K3G5 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vrk3Q8K3G5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vrk3Q8K3G5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vrk3Q8K3G5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vrk3Q8K3G5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.32■□□□□ 0.84
Vrk3Q8K3G5 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.32■□□□□ 0.84
Vrk3Q8K3G5 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vrk3Q8K3G5 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.31■□□□□ 0.84
Vrk3Q8K3G5 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vrk3Q8K3G5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vrk3Q8K3G5 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vrk3Q8K3G5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Vrk3Q8K3G5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vrk3Q8K3G5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vrk3Q8K3G5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vrk3Q8K3G5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vrk3Q8K3G5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vrk3Q8K3G5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Vrk3Q8K3G5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Vrk3Q8K3G5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vrk3Q8K3G5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vrk3Q8K3G5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Vrk3Q8K3G5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vrk3Q8K3G5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vrk3Q8K3G5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vrk3Q8K3G5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Vrk3Q8K3G5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vrk3Q8K3G5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vrk3Q8K3G5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vrk3Q8K3G5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vrk3Q8K3G5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.22■□□□□ 0.83
Vrk3Q8K3G5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.22■□□□□ 0.83
Vrk3Q8K3G5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vrk3Q8K3G5 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vrk3Q8K3G5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vrk3Q8K3G5 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Vrk3Q8K3G5 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vrk3Q8K3G5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vrk3Q8K3G5 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.2■□□□□ 0.82
Vrk3Q8K3G5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vrk3Q8K3G5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Vrk3Q8K3G5 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.19■□□□□ 0.82
Vrk3Q8K3G5 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.19■□□□□ 0.82
Vrk3Q8K3G5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Vrk3Q8K3G5 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.18■□□□□ 0.82
Vrk3Q8K3G5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Vrk3Q8K3G5 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vrk3Q8K3G5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vrk3Q8K3G5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vrk3Q8K3G5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vrk3Q8K3G5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vrk3Q8K3G5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vrk3Q8K3G5 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.16■□□□□ 0.82
Vrk3Q8K3G5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vrk3Q8K3G5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vrk3Q8K3G5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.15■□□□□ 0.82
Vrk3Q8K3G5 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.15■□□□□ 0.82
Vrk3Q8K3G5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Vrk3Q8K3G5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Vrk3Q8K3G5 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vrk3Q8K3G5 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Vrk3Q8K3G5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vrk3Q8K3G5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vrk3Q8K3G5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vrk3Q8K3G5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vrk3Q8K3G5 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vrk3Q8K3G5 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.11■□□□□ 0.81
Vrk3Q8K3G5 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.11■□□□□ 0.81
Vrk3Q8K3G5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.11■□□□□ 0.81
Vrk3Q8K3G5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vrk3Q8K3G5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Vrk3Q8K3G5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms