Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp28Q8CGV8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp28Q8CGV8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.48■□□□□ 0.87
Mmp28Q8CGV8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp28Q8CGV8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp28Q8CGV8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp28Q8CGV8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Mmp28Q8CGV8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp28Q8CGV8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp28Q8CGV8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Mmp28Q8CGV8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.47■□□□□ 0.87
Mmp28Q8CGV8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Mmp28Q8CGV8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp28Q8CGV8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp28Q8CGV8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Mmp28Q8CGV8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.45■□□□□ 0.86
Mmp28Q8CGV8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp28Q8CGV8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp28Q8CGV8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Mmp28Q8CGV8 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.44■□□□□ 0.86
Mmp28Q8CGV8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Mmp28Q8CGV8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Mmp28Q8CGV8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp28Q8CGV8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.42■□□□□ 0.86
Mmp28Q8CGV8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp28Q8CGV8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp28Q8CGV8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp28Q8CGV8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp28Q8CGV8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Mmp28Q8CGV8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Mmp28Q8CGV8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.39■□□□□ 0.86
Mmp28Q8CGV8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Mmp28Q8CGV8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.39■□□□□ 0.85
Mmp28Q8CGV8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Mmp28Q8CGV8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mmp28Q8CGV8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp28Q8CGV8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp28Q8CGV8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Mmp28Q8CGV8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Mmp28Q8CGV8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp28Q8CGV8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp28Q8CGV8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.37■□□□□ 0.85
Mmp28Q8CGV8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp28Q8CGV8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp28Q8CGV8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Mmp28Q8CGV8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp28Q8CGV8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp28Q8CGV8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Mmp28Q8CGV8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp28Q8CGV8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp28Q8CGV8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp28Q8CGV8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp28Q8CGV8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp28Q8CGV8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp28Q8CGV8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp28Q8CGV8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp28Q8CGV8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp28Q8CGV8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp28Q8CGV8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Mmp28Q8CGV8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp28Q8CGV8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Mmp28Q8CGV8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp28Q8CGV8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Mmp28Q8CGV8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp28Q8CGV8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mmp28Q8CGV8 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.33■□□□□ 0.85
Mmp28Q8CGV8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Mmp28Q8CGV8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp28Q8CGV8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Mmp28Q8CGV8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp28Q8CGV8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp28Q8CGV8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp28Q8CGV8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.3■□□□□ 0.84
Mmp28Q8CGV8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp28Q8CGV8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp28Q8CGV8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp28Q8CGV8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp28Q8CGV8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp28Q8CGV8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp28Q8CGV8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp28Q8CGV8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp28Q8CGV8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Mmp28Q8CGV8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp28Q8CGV8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp28Q8CGV8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp28Q8CGV8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp28Q8CGV8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp28Q8CGV8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Mmp28Q8CGV8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp28Q8CGV8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.24■□□□□ 0.83
Mmp28Q8CGV8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp28Q8CGV8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp28Q8CGV8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp28Q8CGV8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp28Q8CGV8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp28Q8CGV8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp28Q8CGV8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp28Q8CGV8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp28Q8CGV8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp28Q8CGV8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms