Protein–RNA interactions for Protein: Q8C4D8

Gm11541, Predicted gene 11541, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11541Q8C4D8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm11541Q8C4D8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.71■■□□□ 1.07
Gm11541Q8C4D8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm11541Q8C4D8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm11541Q8C4D8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm11541Q8C4D8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm11541Q8C4D8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.69■■□□□ 1.06
Gm11541Q8C4D8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm11541Q8C4D8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Gm11541Q8C4D8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm11541Q8C4D8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Gm11541Q8C4D8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm11541Q8C4D8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm11541Q8C4D8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Gm11541Q8C4D8 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.68■■□□□ 1.06
Gm11541Q8C4D8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm11541Q8C4D8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Gm11541Q8C4D8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm11541Q8C4D8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm11541Q8C4D8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm11541Q8C4D8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm11541Q8C4D8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm11541Q8C4D8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Gm11541Q8C4D8 Gm24970-201ENSMUST00000175582 82 ntBASIC21.66■■□□□ 1.06
Gm11541Q8C4D8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm11541Q8C4D8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.65■■□□□ 1.06
Gm11541Q8C4D8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Gm11541Q8C4D8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Gm11541Q8C4D8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Gm11541Q8C4D8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gm11541Q8C4D8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
Gm11541Q8C4D8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gm11541Q8C4D8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.63■■□□□ 1.05
Gm11541Q8C4D8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.63■■□□□ 1.05
Gm11541Q8C4D8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
Gm11541Q8C4D8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Gm11541Q8C4D8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Gm11541Q8C4D8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.61■■□□□ 1.05
Gm11541Q8C4D8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm11541Q8C4D8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gm11541Q8C4D8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm11541Q8C4D8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Gm11541Q8C4D8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Gm11541Q8C4D8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.59■■□□□ 1.05
Gm11541Q8C4D8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Gm11541Q8C4D8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.58■■□□□ 1.05
Gm11541Q8C4D8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Gm11541Q8C4D8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.58■■□□□ 1.04
Gm11541Q8C4D8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Gm11541Q8C4D8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Gm11541Q8C4D8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm11541Q8C4D8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.57■■□□□ 1.04
Gm11541Q8C4D8 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.57■■□□□ 1.04
Gm11541Q8C4D8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm11541Q8C4D8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Gm11541Q8C4D8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.56■■□□□ 1.04
Gm11541Q8C4D8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Gm11541Q8C4D8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Gm11541Q8C4D8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Gm11541Q8C4D8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm11541Q8C4D8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm11541Q8C4D8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Gm11541Q8C4D8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm11541Q8C4D8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Gm11541Q8C4D8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Gm11541Q8C4D8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Gm11541Q8C4D8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Gm11541Q8C4D8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Gm11541Q8C4D8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.52■■□□□ 1.04
Gm11541Q8C4D8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Gm11541Q8C4D8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.52■■□□□ 1.04
Gm11541Q8C4D8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm11541Q8C4D8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Gm11541Q8C4D8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm11541Q8C4D8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm11541Q8C4D8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Gm11541Q8C4D8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.5■■□□□ 1.03
Gm11541Q8C4D8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm11541Q8C4D8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Gm11541Q8C4D8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm11541Q8C4D8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm11541Q8C4D8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm11541Q8C4D8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.47■■□□□ 1.03
Gm11541Q8C4D8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Gm11541Q8C4D8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Gm11541Q8C4D8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.46■■□□□ 1.03
Gm11541Q8C4D8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Gm11541Q8C4D8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Gm11541Q8C4D8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Gm11541Q8C4D8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Gm11541Q8C4D8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Gm11541Q8C4D8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Gm11541Q8C4D8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm11541Q8C4D8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Gm11541Q8C4D8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Gm11541Q8C4D8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Gm11541Q8C4D8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.43■■□□□ 1.02
Gm11541Q8C4D8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.43■■□□□ 1.02
Gm11541Q8C4D8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm11541Q8C4D8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms