Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Vps9d1Q8C190 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Vps9d1Q8C190 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Vps9d1Q8C190 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Vps9d1Q8C190 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Vps9d1Q8C190 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Vps9d1Q8C190 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Vps9d1Q8C190 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Vps9d1Q8C190 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.49■■□□□ 1.19
Vps9d1Q8C190 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.48■■□□□ 1.19
Vps9d1Q8C190 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Vps9d1Q8C190 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Vps9d1Q8C190 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Vps9d1Q8C190 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Vps9d1Q8C190 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Vps9d1Q8C190 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Vps9d1Q8C190 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Vps9d1Q8C190 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Vps9d1Q8C190 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Vps9d1Q8C190 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Vps9d1Q8C190 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Vps9d1Q8C190 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Vps9d1Q8C190 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Vps9d1Q8C190 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Vps9d1Q8C190 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Vps9d1Q8C190 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Vps9d1Q8C190 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Vps9d1Q8C190 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
Vps9d1Q8C190 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.4■■□□□ 1.18
Vps9d1Q8C190 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Vps9d1Q8C190 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Vps9d1Q8C190 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Vps9d1Q8C190 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Vps9d1Q8C190 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Vps9d1Q8C190 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Vps9d1Q8C190 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Vps9d1Q8C190 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Vps9d1Q8C190 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Vps9d1Q8C190 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Vps9d1Q8C190 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Vps9d1Q8C190 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Vps9d1Q8C190 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Vps9d1Q8C190 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Vps9d1Q8C190 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Vps9d1Q8C190 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Vps9d1Q8C190 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Vps9d1Q8C190 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.35■■□□□ 1.17
Vps9d1Q8C190 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Vps9d1Q8C190 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Vps9d1Q8C190 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Vps9d1Q8C190 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.34■■□□□ 1.17
Vps9d1Q8C190 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Vps9d1Q8C190 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Vps9d1Q8C190 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.33■■□□□ 1.17
Vps9d1Q8C190 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Vps9d1Q8C190 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Vps9d1Q8C190 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Vps9d1Q8C190 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vps9d1Q8C190 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Vps9d1Q8C190 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Vps9d1Q8C190 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.3■■□□□ 1.16
Vps9d1Q8C190 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Vps9d1Q8C190 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Vps9d1Q8C190 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Vps9d1Q8C190 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.29■■□□□ 1.16
Vps9d1Q8C190 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Vps9d1Q8C190 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Vps9d1Q8C190 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Vps9d1Q8C190 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Vps9d1Q8C190 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.28■■□□□ 1.16
Vps9d1Q8C190 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.28■■□□□ 1.16
Vps9d1Q8C190 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Vps9d1Q8C190 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Vps9d1Q8C190 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Vps9d1Q8C190 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Vps9d1Q8C190 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Vps9d1Q8C190 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Vps9d1Q8C190 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.26■■□□□ 1.15
Vps9d1Q8C190 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Vps9d1Q8C190 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Vps9d1Q8C190 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Vps9d1Q8C190 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Vps9d1Q8C190 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Vps9d1Q8C190 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Vps9d1Q8C190 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Vps9d1Q8C190 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Vps9d1Q8C190 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.25■■□□□ 1.15
Vps9d1Q8C190 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Vps9d1Q8C190 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Vps9d1Q8C190 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
Vps9d1Q8C190 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.23■■□□□ 1.15
Vps9d1Q8C190 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Vps9d1Q8C190 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.23■■□□□ 1.15
Vps9d1Q8C190 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Vps9d1Q8C190 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Vps9d1Q8C190 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vps9d1Q8C190 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.22■■□□□ 1.15
Vps9d1Q8C190 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Vps9d1Q8C190 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Vps9d1Q8C190 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms