Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cpne3Q8BT60 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cpne3Q8BT60 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cpne3Q8BT60 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.31■■□□□ 1.32
Cpne3Q8BT60 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cpne3Q8BT60 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cpne3Q8BT60 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.29■■□□□ 1.32
Cpne3Q8BT60 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cpne3Q8BT60 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cpne3Q8BT60 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cpne3Q8BT60 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cpne3Q8BT60 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cpne3Q8BT60 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cpne3Q8BT60 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cpne3Q8BT60 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Cpne3Q8BT60 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Cpne3Q8BT60 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Cpne3Q8BT60 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cpne3Q8BT60 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Cpne3Q8BT60 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cpne3Q8BT60 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cpne3Q8BT60 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cpne3Q8BT60 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cpne3Q8BT60 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cpne3Q8BT60 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cpne3Q8BT60 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cpne3Q8BT60 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cpne3Q8BT60 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Cpne3Q8BT60 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cpne3Q8BT60 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cpne3Q8BT60 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Cpne3Q8BT60 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cpne3Q8BT60 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cpne3Q8BT60 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cpne3Q8BT60 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cpne3Q8BT60 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cpne3Q8BT60 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cpne3Q8BT60 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Cpne3Q8BT60 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Cpne3Q8BT60 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cpne3Q8BT60 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.13■■□□□ 1.29
Cpne3Q8BT60 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cpne3Q8BT60 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Cpne3Q8BT60 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cpne3Q8BT60 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cpne3Q8BT60 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cpne3Q8BT60 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.1■■□□□ 1.29
Cpne3Q8BT60 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cpne3Q8BT60 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cpne3Q8BT60 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.09■■□□□ 1.29
Cpne3Q8BT60 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.09■■□□□ 1.29
Cpne3Q8BT60 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cpne3Q8BT60 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cpne3Q8BT60 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cpne3Q8BT60 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cpne3Q8BT60 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cpne3Q8BT60 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Cpne3Q8BT60 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cpne3Q8BT60 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.04■■□□□ 1.28
Cpne3Q8BT60 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cpne3Q8BT60 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.02■■□□□ 1.28
Cpne3Q8BT60 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Cpne3Q8BT60 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cpne3Q8BT60 Zfp131-205ENSMUST00000223812 663 ntBASIC23.01■■□□□ 1.27
Cpne3Q8BT60 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cpne3Q8BT60 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Cpne3Q8BT60 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Cpne3Q8BT60 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cpne3Q8BT60 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.99■■□□□ 1.27
Cpne3Q8BT60 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.99■■□□□ 1.27
Cpne3Q8BT60 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cpne3Q8BT60 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cpne3Q8BT60 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cpne3Q8BT60 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.98■■□□□ 1.27
Cpne3Q8BT60 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cpne3Q8BT60 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Cpne3Q8BT60 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cpne3Q8BT60 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cpne3Q8BT60 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cpne3Q8BT60 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.95■■□□□ 1.26
Cpne3Q8BT60 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.95■■□□□ 1.26
Cpne3Q8BT60 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Cpne3Q8BT60 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.95■■□□□ 1.26
Cpne3Q8BT60 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Cpne3Q8BT60 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cpne3Q8BT60 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.94■■□□□ 1.26
Cpne3Q8BT60 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Cpne3Q8BT60 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cpne3Q8BT60 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Cpne3Q8BT60 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Cpne3Q8BT60 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
Cpne3Q8BT60 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Cpne3Q8BT60 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.92■■□□□ 1.26
Cpne3Q8BT60 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Cpne3Q8BT60 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.91■■□□□ 1.26
Cpne3Q8BT60 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cpne3Q8BT60 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Cpne3Q8BT60 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.9■■□□□ 1.26
Cpne3Q8BT60 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.89■■□□□ 1.25
Cpne3Q8BT60 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms