Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Suds3Q8BR65 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Suds3Q8BR65 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Suds3Q8BR65 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Suds3Q8BR65 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Suds3Q8BR65 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.63■■□□□ 1.53
Suds3Q8BR65 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Suds3Q8BR65 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.63■■□□□ 1.53
Suds3Q8BR65 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Suds3Q8BR65 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
Suds3Q8BR65 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.61■■□□□ 1.53
Suds3Q8BR65 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.61■■□□□ 1.53
Suds3Q8BR65 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.61■■□□□ 1.53
Suds3Q8BR65 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.61■■□□□ 1.53
Suds3Q8BR65 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Suds3Q8BR65 Gm24970-201ENSMUST00000175582 82 ntBASIC24.6■■□□□ 1.53
Suds3Q8BR65 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.6■■□□□ 1.53
Suds3Q8BR65 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Suds3Q8BR65 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Suds3Q8BR65 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Suds3Q8BR65 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Suds3Q8BR65 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Suds3Q8BR65 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Suds3Q8BR65 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Suds3Q8BR65 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Suds3Q8BR65 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.57■■□□□ 1.52
Suds3Q8BR65 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Suds3Q8BR65 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.54■■□□□ 1.52
Suds3Q8BR65 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Suds3Q8BR65 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Suds3Q8BR65 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Suds3Q8BR65 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Suds3Q8BR65 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Suds3Q8BR65 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Suds3Q8BR65 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
Suds3Q8BR65 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Suds3Q8BR65 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Suds3Q8BR65 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Suds3Q8BR65 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Suds3Q8BR65 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Suds3Q8BR65 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Suds3Q8BR65 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Suds3Q8BR65 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Suds3Q8BR65 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Suds3Q8BR65 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Suds3Q8BR65 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Suds3Q8BR65 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Suds3Q8BR65 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
Suds3Q8BR65 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.45■■□□□ 1.5
Suds3Q8BR65 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Suds3Q8BR65 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Suds3Q8BR65 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.44■■□□□ 1.5
Suds3Q8BR65 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Suds3Q8BR65 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Suds3Q8BR65 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Suds3Q8BR65 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Suds3Q8BR65 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Suds3Q8BR65 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.41■■□□□ 1.5
Suds3Q8BR65 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.41■■□□□ 1.5
Suds3Q8BR65 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.41■■□□□ 1.5
Suds3Q8BR65 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.4■■□□□ 1.5
Suds3Q8BR65 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Suds3Q8BR65 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Suds3Q8BR65 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Suds3Q8BR65 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Suds3Q8BR65 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
Suds3Q8BR65 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Suds3Q8BR65 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.38■■□□□ 1.49
Suds3Q8BR65 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Suds3Q8BR65 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Suds3Q8BR65 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Suds3Q8BR65 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Suds3Q8BR65 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.35■■□□□ 1.49
Suds3Q8BR65 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Suds3Q8BR65 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Suds3Q8BR65 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.35■■□□□ 1.49
Suds3Q8BR65 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Suds3Q8BR65 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Suds3Q8BR65 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.34■■□□□ 1.49
Suds3Q8BR65 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Suds3Q8BR65 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Suds3Q8BR65 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Suds3Q8BR65 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Suds3Q8BR65 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Suds3Q8BR65 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Suds3Q8BR65 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Suds3Q8BR65 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Suds3Q8BR65 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Suds3Q8BR65 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Suds3Q8BR65 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Suds3Q8BR65 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Suds3Q8BR65 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC24.27■■□□□ 1.48
Suds3Q8BR65 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Suds3Q8BR65 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Suds3Q8BR65 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.26■■□□□ 1.47
Suds3Q8BR65 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
Suds3Q8BR65 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Suds3Q8BR65 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Suds3Q8BR65 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Suds3Q8BR65 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms