Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ccdc116Q80X53 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Ccdc116Q80X53 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ccdc116Q80X53 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ccdc116Q80X53 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Ccdc116Q80X53 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.95■■□□□ 1.43
Ccdc116Q80X53 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ccdc116Q80X53 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.94■■□□□ 1.42
Ccdc116Q80X53 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Ccdc116Q80X53 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ccdc116Q80X53 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Ccdc116Q80X53 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ccdc116Q80X53 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Ccdc116Q80X53 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.92■■□□□ 1.42
Ccdc116Q80X53 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ccdc116Q80X53 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ccdc116Q80X53 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Ccdc116Q80X53 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ccdc116Q80X53 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.89■■□□□ 1.41
Ccdc116Q80X53 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ccdc116Q80X53 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc116Q80X53 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ccdc116Q80X53 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ccdc116Q80X53 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Ccdc116Q80X53 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.86■■□□□ 1.41
Ccdc116Q80X53 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc116Q80X53 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc116Q80X53 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc116Q80X53 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.84■■□□□ 1.41
Ccdc116Q80X53 Zfp131-205ENSMUST00000223812 663 ntBASIC23.84■■□□□ 1.41
Ccdc116Q80X53 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc116Q80X53 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc116Q80X53 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc116Q80X53 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc116Q80X53 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc116Q80X53 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.8■■□□□ 1.4
Ccdc116Q80X53 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Ccdc116Q80X53 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Ccdc116Q80X53 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Ccdc116Q80X53 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc116Q80X53 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc116Q80X53 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc116Q80X53 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Ccdc116Q80X53 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc116Q80X53 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc116Q80X53 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc116Q80X53 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.76■■□□□ 1.39
Ccdc116Q80X53 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc116Q80X53 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc116Q80X53 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc116Q80X53 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Ccdc116Q80X53 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc116Q80X53 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc116Q80X53 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.74■■□□□ 1.39
Ccdc116Q80X53 Gm9397-201ENSMUST00000200125 605 ntBASIC23.74■■□□□ 1.39
Ccdc116Q80X53 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc116Q80X53 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.73■■□□□ 1.39
Ccdc116Q80X53 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc116Q80X53 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.73■■□□□ 1.39
Ccdc116Q80X53 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc116Q80X53 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.72■■□□□ 1.39
Ccdc116Q80X53 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.72■■□□□ 1.39
Ccdc116Q80X53 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc116Q80X53 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.7■■□□□ 1.38
Ccdc116Q80X53 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Ccdc116Q80X53 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Ccdc116Q80X53 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ccdc116Q80X53 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc116Q80X53 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.69■■□□□ 1.38
Ccdc116Q80X53 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Ccdc116Q80X53 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc116Q80X53 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc116Q80X53 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.67■■□□□ 1.38
Ccdc116Q80X53 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.67■■□□□ 1.38
Ccdc116Q80X53 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.66■■□□□ 1.38
Ccdc116Q80X53 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc116Q80X53 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.65■■□□□ 1.38
Ccdc116Q80X53 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Ccdc116Q80X53 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.63■■□□□ 1.37
Ccdc116Q80X53 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ccdc116Q80X53 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Ccdc116Q80X53 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Ccdc116Q80X53 Gm24970-201ENSMUST00000175582 82 ntBASIC23.62■■□□□ 1.37
Ccdc116Q80X53 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ccdc116Q80X53 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ccdc116Q80X53 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ccdc116Q80X53 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.59■■□□□ 1.37
Ccdc116Q80X53 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ccdc116Q80X53 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.59■■□□□ 1.37
Ccdc116Q80X53 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.58■■□□□ 1.37
Ccdc116Q80X53 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.36
Ccdc116Q80X53 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ccdc116Q80X53 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ccdc116Q80X53 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ccdc116Q80X53 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.55■■□□□ 1.36
Ccdc116Q80X53 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ccdc116Q80X53 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ccdc116Q80X53 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
Ccdc116Q80X53 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Ccdc116Q80X53 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms