Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28.71■■■□□ 2.19
Foxn1Q61575 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Foxn1Q61575 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28.7■■■□□ 2.18
Foxn1Q61575 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC28.7■■■□□ 2.18
Foxn1Q61575 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Foxn1Q61575 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
Foxn1Q61575 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Foxn1Q61575 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
Foxn1Q61575 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Foxn1Q61575 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.67■■■□□ 2.18
Foxn1Q61575 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Foxn1Q61575 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC28.67■■■□□ 2.18
Foxn1Q61575 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
Foxn1Q61575 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Foxn1Q61575 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28.65■■■□□ 2.18
Foxn1Q61575 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Foxn1Q61575 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
Foxn1Q61575 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Foxn1Q61575 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
Foxn1Q61575 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Foxn1Q61575 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Foxn1Q61575 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Foxn1Q61575 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
Foxn1Q61575 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC28.59■■■□□ 2.17
Foxn1Q61575 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Foxn1Q61575 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Foxn1Q61575 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC28.57■■■□□ 2.16
Foxn1Q61575 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC28.57■■■□□ 2.16
Foxn1Q61575 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC28.57■■■□□ 2.16
Foxn1Q61575 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
Foxn1Q61575 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Foxn1Q61575 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Foxn1Q61575 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Foxn1Q61575 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
Foxn1Q61575 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Foxn1Q61575 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
Foxn1Q61575 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Foxn1Q61575 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC28.54■■■□□ 2.16
Foxn1Q61575 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
Foxn1Q61575 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Foxn1Q61575 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Foxn1Q61575 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
Foxn1Q61575 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Foxn1Q61575 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Foxn1Q61575 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
Foxn1Q61575 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Foxn1Q61575 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC28.5■■■□□ 2.15
Foxn1Q61575 Gm12366-201ENSMUST00000121722 873 ntBASIC28.5■■■□□ 2.15
Foxn1Q61575 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC28.5■■■□□ 2.15
Foxn1Q61575 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC28.5■■■□□ 2.15
Foxn1Q61575 Gm5786-201ENSMUST00000085368 882 ntBASIC28.5■■■□□ 2.15
Foxn1Q61575 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Foxn1Q61575 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Foxn1Q61575 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Foxn1Q61575 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Foxn1Q61575 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Foxn1Q61575 Gm6345-201ENSMUST00000180378 1691 ntBASIC28.46■■■□□ 2.15
Foxn1Q61575 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28.46■■■□□ 2.15
Foxn1Q61575 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Foxn1Q61575 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Foxn1Q61575 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Foxn1Q61575 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC28.45■■■□□ 2.14
Foxn1Q61575 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC28.44■■■□□ 2.14
Foxn1Q61575 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Foxn1Q61575 Gm30346-201ENSMUST00000218641 1699 ntBASIC28.42■■■□□ 2.14
Foxn1Q61575 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Foxn1Q61575 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.39■■■□□ 2.14
Foxn1Q61575 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Foxn1Q61575 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Foxn1Q61575 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Foxn1Q61575 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC28.38■■■□□ 2.13
Foxn1Q61575 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Foxn1Q61575 Scarna2-201ENSMUST00000157560 414 ntBASIC28.35■■■□□ 2.13
Foxn1Q61575 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Foxn1Q61575 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Foxn1Q61575 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Foxn1Q61575 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC28.32■■■□□ 2.12
Foxn1Q61575 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Foxn1Q61575 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Foxn1Q61575 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Foxn1Q61575 Gm11687-201ENSMUST00000118911 886 ntBASIC28.31■■■□□ 2.12
Foxn1Q61575 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC28.31■■■□□ 2.12
Foxn1Q61575 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Foxn1Q61575 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
Foxn1Q61575 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Foxn1Q61575 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC28.3■■■□□ 2.12
Foxn1Q61575 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
Foxn1Q61575 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC28.28■■■□□ 2.12
Foxn1Q61575 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Foxn1Q61575 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Foxn1Q61575 Gm22567-201ENSMUST00000175542 342 ntBASIC28.27■■■□□ 2.12
Foxn1Q61575 Gm4799-201ENSMUST00000095396 657 ntBASIC28.27■■■□□ 2.12
Foxn1Q61575 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Foxn1Q61575 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Foxn1Q61575 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
Foxn1Q61575 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC28.26■■■□□ 2.11
Foxn1Q61575 Gm9806-201ENSMUST00000051080 552 ntBASIC28.26■■■□□ 2.11
Foxn1Q61575 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Foxn1Q61575 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
Foxn1Q61575 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms