Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Foxf1Q61080 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Foxf1Q61080 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Foxf1Q61080 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Foxf1Q61080 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Foxf1Q61080 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Foxf1Q61080 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Foxf1Q61080 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.39■□□□□ 0.85
Foxf1Q61080 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Foxf1Q61080 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Foxf1Q61080 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Foxf1Q61080 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Foxf1Q61080 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Foxf1Q61080 Gm9397-201ENSMUST00000200125 605 ntBASIC20.38■□□□□ 0.85
Foxf1Q61080 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.37■□□□□ 0.85
Foxf1Q61080 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Foxf1Q61080 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Foxf1Q61080 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.36■□□□□ 0.85
Foxf1Q61080 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Foxf1Q61080 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Foxf1Q61080 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Foxf1Q61080 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Foxf1Q61080 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Foxf1Q61080 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Foxf1Q61080 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Foxf1Q61080 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Foxf1Q61080 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Foxf1Q61080 Gm24970-201ENSMUST00000175582 82 ntBASIC20.3■□□□□ 0.84
Foxf1Q61080 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.3■□□□□ 0.84
Foxf1Q61080 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Foxf1Q61080 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Foxf1Q61080 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.29■□□□□ 0.84
Foxf1Q61080 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Foxf1Q61080 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.28■□□□□ 0.84
Foxf1Q61080 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.28■□□□□ 0.84
Foxf1Q61080 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.28■□□□□ 0.84
Foxf1Q61080 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Foxf1Q61080 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.27■□□□□ 0.84
Foxf1Q61080 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.27■□□□□ 0.84
Foxf1Q61080 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.27■□□□□ 0.84
Foxf1Q61080 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Foxf1Q61080 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxf1Q61080 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxf1Q61080 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Foxf1Q61080 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Foxf1Q61080 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxf1Q61080 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.25■□□□□ 0.83
Foxf1Q61080 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxf1Q61080 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Foxf1Q61080 Gm45855-201ENSMUST00000212546 880 ntBASIC20.25■□□□□ 0.83
Foxf1Q61080 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxf1Q61080 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxf1Q61080 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Foxf1Q61080 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxf1Q61080 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxf1Q61080 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Foxf1Q61080 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Foxf1Q61080 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Foxf1Q61080 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.22■□□□□ 0.83
Foxf1Q61080 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.22■□□□□ 0.83
Foxf1Q61080 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Foxf1Q61080 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Foxf1Q61080 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Foxf1Q61080 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.2■□□□□ 0.82
Foxf1Q61080 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Foxf1Q61080 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxf1Q61080 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxf1Q61080 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxf1Q61080 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.18■□□□□ 0.82
Foxf1Q61080 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.18■□□□□ 0.82
Foxf1Q61080 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxf1Q61080 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Foxf1Q61080 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Foxf1Q61080 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Foxf1Q61080 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Foxf1Q61080 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.15■□□□□ 0.82
Foxf1Q61080 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Foxf1Q61080 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Foxf1Q61080 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Foxf1Q61080 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Foxf1Q61080 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Foxf1Q61080 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Foxf1Q61080 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Foxf1Q61080 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Foxf1Q61080 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Foxf1Q61080 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Foxf1Q61080 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Foxf1Q61080 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Foxf1Q61080 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Foxf1Q61080 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Foxf1Q61080 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Foxf1Q61080 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Foxf1Q61080 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Foxf1Q61080 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Foxf1Q61080 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Foxf1Q61080 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Foxf1Q61080 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Foxf1Q61080 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Foxf1Q61080 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Foxf1Q61080 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms