Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Tff1Q08423 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Tff1Q08423 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tff1Q08423 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tff1Q08423 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tff1Q08423 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Tff1Q08423 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Tff1Q08423 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Tff1Q08423 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Tff1Q08423 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.93■□□□□ 0.78
Tff1Q08423 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Tff1Q08423 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Tff1Q08423 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tff1Q08423 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Tff1Q08423 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tff1Q08423 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tff1Q08423 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tff1Q08423 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tff1Q08423 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tff1Q08423 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.9■□□□□ 0.78
Tff1Q08423 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tff1Q08423 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tff1Q08423 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tff1Q08423 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tff1Q08423 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tff1Q08423 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tff1Q08423 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tff1Q08423 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tff1Q08423 Gm9397-201ENSMUST00000200125 605 ntBASIC19.88■□□□□ 0.77
Tff1Q08423 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tff1Q08423 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tff1Q08423 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Tff1Q08423 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tff1Q08423 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tff1Q08423 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tff1Q08423 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.86■□□□□ 0.77
Tff1Q08423 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.86■□□□□ 0.77
Tff1Q08423 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Tff1Q08423 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tff1Q08423 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Tff1Q08423 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tff1Q08423 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.84■□□□□ 0.77
Tff1Q08423 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tff1Q08423 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tff1Q08423 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tff1Q08423 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
Tff1Q08423 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.83■□□□□ 0.77
Tff1Q08423 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tff1Q08423 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tff1Q08423 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tff1Q08423 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Tff1Q08423 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Tff1Q08423 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tff1Q08423 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Tff1Q08423 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tff1Q08423 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tff1Q08423 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Tff1Q08423 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tff1Q08423 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tff1Q08423 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tff1Q08423 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tff1Q08423 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Tff1Q08423 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tff1Q08423 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tff1Q08423 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.78■□□□□ 0.76
Tff1Q08423 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tff1Q08423 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Tff1Q08423 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tff1Q08423 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Tff1Q08423 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Tff1Q08423 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tff1Q08423 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tff1Q08423 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tff1Q08423 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Tff1Q08423 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tff1Q08423 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tff1Q08423 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tff1Q08423 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tff1Q08423 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tff1Q08423 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.74■□□□□ 0.75
Tff1Q08423 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tff1Q08423 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tff1Q08423 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Tff1Q08423 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tff1Q08423 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.73■□□□□ 0.75
Tff1Q08423 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tff1Q08423 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tff1Q08423 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.72■□□□□ 0.75
Tff1Q08423 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Tff1Q08423 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tff1Q08423 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tff1Q08423 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tff1Q08423 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.71■□□□□ 0.75
Tff1Q08423 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tff1Q08423 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tff1Q08423 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Tff1Q08423 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tff1Q08423 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Tff1Q08423 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.7■□□□□ 0.74
Tff1Q08423 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms