Protein–RNA interactions for Protein: P04212

T-cell receptor beta chain V region LB2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04212 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
P04212 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
P04212 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.59■□□□□ 0.73
P04212 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
P04212 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
P04212 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
P04212 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
P04212 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
P04212 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
P04212 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
P04212 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
P04212 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
P04212 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
P04212 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
P04212 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
P04212 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
P04212 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.55■□□□□ 0.72
P04212 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
P04212 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
P04212 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
P04212 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
P04212 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
P04212 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
P04212 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
P04212 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
P04212 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
P04212 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P04212 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.51■□□□□ 0.71
P04212 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
P04212 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
P04212 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P04212 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
P04212 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
P04212 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P04212 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
P04212 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.49■□□□□ 0.71
P04212 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
P04212 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P04212 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P04212 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P04212 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
P04212 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P04212 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
P04212 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P04212 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P04212 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P04212 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.44■□□□□ 0.7
P04212 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
P04212 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
P04212 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
P04212 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P04212 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
P04212 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P04212 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P04212 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
P04212 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
P04212 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
P04212 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
P04212 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.42■□□□□ 0.7
P04212 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
P04212 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
P04212 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.41■□□□□ 0.7
P04212 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04212 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P04212 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
P04212 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
P04212 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P04212 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P04212 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P04212 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P04212 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.37■□□□□ 0.69
P04212 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04212 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
P04212 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04212 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04212 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04212 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04212 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04212 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.35■□□□□ 0.69
P04212 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P04212 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P04212 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P04212 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
P04212 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
P04212 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
P04212 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.3■□□□□ 0.68
P04212 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
P04212 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P04212 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04212 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04212 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04212 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.29■□□□□ 0.68
P04212 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
P04212 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04212 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04212 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04212 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P04212 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
P04212 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P04212 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms