Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trdv2-1A0A0G2JGB9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trdv2-1A0A0G2JGB9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trdv2-1A0A0G2JGB9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trdv2-1A0A0G2JGB9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trdv2-1A0A0G2JGB9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trdv2-1A0A0G2JGB9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trdv2-1A0A0G2JGB9 AL845457.1-201ENSMUST00000197244 68 ntBASIC17.66■□□□□ 0.42
Trdv2-1A0A0G2JGB9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trdv2-1A0A0G2JGB9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trdv2-1A0A0G2JGB9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trdv2-1A0A0G2JGB9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trdv2-1A0A0G2JGB9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.64■□□□□ 0.41
Trdv2-1A0A0G2JGB9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Trdv2-1A0A0G2JGB9 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.63■□□□□ 0.41
Trdv2-1A0A0G2JGB9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trdv2-1A0A0G2JGB9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.63■□□□□ 0.41
Trdv2-1A0A0G2JGB9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trdv2-1A0A0G2JGB9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trdv2-1A0A0G2JGB9 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.62■□□□□ 0.41
Trdv2-1A0A0G2JGB9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Trdv2-1A0A0G2JGB9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trdv2-1A0A0G2JGB9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trdv2-1A0A0G2JGB9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trdv2-1A0A0G2JGB9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trdv2-1A0A0G2JGB9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trdv2-1A0A0G2JGB9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trdv2-1A0A0G2JGB9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trdv2-1A0A0G2JGB9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trdv2-1A0A0G2JGB9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trdv2-1A0A0G2JGB9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trdv2-1A0A0G2JGB9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trdv2-1A0A0G2JGB9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC17.55■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.53■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trdv2-1A0A0G2JGB9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Trdv2-1A0A0G2JGB9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trdv2-1A0A0G2JGB9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Trdv2-1A0A0G2JGB9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trdv2-1A0A0G2JGB9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trdv2-1A0A0G2JGB9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Trdv2-1A0A0G2JGB9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trdv2-1A0A0G2JGB9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trdv2-1A0A0G2JGB9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trdv2-1A0A0G2JGB9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trdv2-1A0A0G2JGB9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trdv2-1A0A0G2JGB9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trdv2-1A0A0G2JGB9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trdv2-1A0A0G2JGB9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trdv2-1A0A0G2JGB9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trdv2-1A0A0G2JGB9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trdv2-1A0A0G2JGB9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trdv2-1A0A0G2JGB9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trdv2-1A0A0G2JGB9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trdv2-1A0A0G2JGB9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.45■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trdv2-1A0A0G2JGB9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 7.8 ms