Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.15□□□□□ -1.58
H2afb3S4R1G7 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC5.15□□□□□ -1.58
H2afb3S4R1G7 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
H2afb3S4R1G7 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
H2afb3S4R1G7 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm11879-201ENSMUST00000121885 702 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm25826-201ENSMUST00000157090 137 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm26106-201ENSMUST00000157254 228 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm24741-201ENSMUST00000158857 106 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm20689-201ENSMUST00000176033 279 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm18006-201ENSMUST00000177411 662 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm29519-201ENSMUST00000186994 398 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm18444-201ENSMUST00000191239 629 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm37475-201ENSMUST00000193107 1015 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm36997-201ENSMUST00000195090 707 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm8891-201ENSMUST00000198546 832 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm43033-201ENSMUST00000199682 425 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm43849-201ENSMUST00000201086 215 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm44219-201ENSMUST00000203005 273 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm5735-201ENSMUST00000207053 167 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm18877-201ENSMUST00000207706 539 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm19033-201ENSMUST00000208516 964 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm17850-201ENSMUST00000210023 1154 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm8523-201ENSMUST00000211386 552 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 AC165292.1-201ENSMUST00000215218 620 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 AC111046.1-201ENSMUST00000217715 412 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 AC174082.2-201ENSMUST00000222094 543 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm24454-201ENSMUST00000083349 132 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm44800-201ENSMUST00000207510 1855 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Gm18422-202ENSMUST00000203798 2214 ntBASIC5.15□□□□□ -1.59
H2afb3S4R1G7 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Gm13114-201ENSMUST00000117605 106 ntBASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Gm2003-201ENSMUST00000118537 636 ntBASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Gm1989-201ENSMUST00000126244 636 ntBASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Gm23069-201ENSMUST00000158240 311 ntBASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Gm24682-201ENSMUST00000158764 137 ntBASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
H2afb3S4R1G7 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms