Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim39Q9ESN2 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Gm22707-201ENSMUST00000103834 110 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Gm14050-201ENSMUST00000117052 346 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Gm15203-201ENSMUST00000117668 455 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Gm12016-201ENSMUST00000119079 681 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Ear-ps7-201ENSMUST00000161287 442 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Gm3216-201ENSMUST00000166927 486 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Trbv10-201ENSMUST00000168322 289 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Gm25874-201ENSMUST00000178030 79 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Gm21182-201ENSMUST00000178899 794 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Mir378d-201ENSMUST00000184232 110 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Gm20932-201ENSMUST00000189115 694 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Gm18553-201ENSMUST00000194152 634 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Gm44409-201ENSMUST00000198810 166 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Gm8921-201ENSMUST00000204306 649 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Gm44590-201ENSMUST00000206161 391 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Gm45042-201ENSMUST00000207377 211 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Gm5176-202ENSMUST00000220267 583 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 AC156576.2-202ENSMUST00000222525 411 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Gm2754-201ENSMUST00000223383 589 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 CT025630.2-201ENSMUST00000228293 487 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Gm13340-201ENSMUST00000117219 1545 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.38□□□□□ -1.39
Trim39Q9ESN2 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trim39Q9ESN2 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim39Q9ESN2 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trim39Q9ESN2 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim39Q9ESN2 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim39Q9ESN2 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim39Q9ESN2 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim39Q9ESN2 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
Trim39Q9ESN2 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.37□□□□□ -1.39
Trim39Q9ESN2 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trim39Q9ESN2 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trim39Q9ESN2 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trim39Q9ESN2 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim39Q9ESN2 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trim39Q9ESN2 Gm37138-201ENSMUST00000194564 2089 ntBASIC6.37□□□□□ -1.39
Trim39Q9ESN2 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim39Q9ESN2 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim39Q9ESN2 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.37□□□□□ -1.39
Trim39Q9ESN2 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC6.37□□□□□ -1.39
Trim39Q9ESN2 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.37□□□□□ -1.39
Trim39Q9ESN2 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Trim39Q9ESN2 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trim39Q9ESN2 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trim39Q9ESN2 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trim39Q9ESN2 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim39Q9ESN2 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms