Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Gm19136-201ENSMUST00000190706 2067 ntBASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Gm8595-201ENSMUST00000118250 630 ntBASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Atf1-ps-201ENSMUST00000120608 810 ntBASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Gm23233-201ENSMUST00000157301 137 ntBASIC6.02□□□□□ -1.45
Smc1aQ9CU62 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Gm4832-201ENSMUST00000182679 399 ntBASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Gm8669-201ENSMUST00000183839 945 ntBASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Gm27855-201ENSMUST00000184122 128 ntBASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC6.02□□□□□ -1.45
Smc1aQ9CU62 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Gm37173-201ENSMUST00000194498 1017 ntBASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Gm31306-201ENSMUST00000197517 508 ntBASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC6.02□□□□□ -1.45
Smc1aQ9CU62 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Gm44184-201ENSMUST00000204290 132 ntBASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Smc1aQ9CU62 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.02□□□□□ -1.45
Smc1aQ9CU62 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC6.02□□□□□ -1.45
Smc1aQ9CU62 AC073947.1-201ENSMUST00000216991 649 ntBASIC6.02□□□□□ -1.45
Smc1aQ9CU62 AC158633.1-201ENSMUST00000219892 649 ntBASIC6.02□□□□□ -1.45
Smc1aQ9CU62 AC192088.3-201ENSMUST00000227858 831 ntBASIC6.02□□□□□ -1.45
Smc1aQ9CU62 AC164295.2-201ENSMUST00000228539 757 ntBASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Gm23795-201ENSMUST00000084006 137 ntBASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Gm43319-201ENSMUST00000198036 2270 ntBASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Gm37482-201ENSMUST00000194899 2791 ntBASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Gm16270-201ENSMUST00000160327 3238 ntBASIC6.02□□□□□ -1.45
Smc1aQ9CU62 AC140299.2-201ENSMUST00000219546 1969 ntBASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Smc1aQ9CU62 AC116797.2-201ENSMUST00000224763 4221 ntBASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Gm44739-201ENSMUST00000205294 1426 ntBASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Gm45177-201ENSMUST00000209104 2307 ntBASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Gm43567-201ENSMUST00000197581 1978 ntBASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Gm44695-201ENSMUST00000205567 1631 ntBASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Gm14576-201ENSMUST00000118073 1111 ntBASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Gm6427-201ENSMUST00000118721 979 ntBASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Gm2199-201ENSMUST00000119065 874 ntBASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Gm7670-201ENSMUST00000121272 641 ntBASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Gm3216-201ENSMUST00000166927 486 ntBASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Gm3141-201ENSMUST00000168726 499 ntBASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Gm28061-201ENSMUST00000189085 807 ntBASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Gm37932-201ENSMUST00000192258 1167 ntBASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Gm44456-201ENSMUST00000196554 89 ntBASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC6.01□□□□□ -1.45
Smc1aQ9CU62 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC6.01□□□□□ -1.45
Smc1aQ9CU62 AL807824.1-201ENSMUST00000223151 183 ntBASIC6.01□□□□□ -1.45
Smc1aQ9CU62 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Smc1aQ9CU62 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Smc1aQ9CU62 Gm13712-201ENSMUST00000117484 2295 ntBASIC6□□□□□ -1.45
Smc1aQ9CU62 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Smc1aQ9CU62 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC6□□□□□ -1.45
Smc1aQ9CU62 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Smc1aQ9CU62 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Smc1aQ9CU62 Gm25422-201ENSMUST00000104219 129 ntBASIC6□□□□□ -1.45
Smc1aQ9CU62 Mir292-201ENSMUST00000104847 82 ntBASIC6□□□□□ -1.45
Smc1aQ9CU62 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC6□□□□□ -1.45
Smc1aQ9CU62 Gm12281-201ENSMUST00000119536 298 ntBASIC6□□□□□ -1.45
Smc1aQ9CU62 Gm6175-201ENSMUST00000121351 400 ntBASIC6□□□□□ -1.45
Smc1aQ9CU62 Gm12732-201ENSMUST00000121688 180 ntBASIC6□□□□□ -1.45
Smc1aQ9CU62 Mir1963-201ENSMUST00000158594 59 ntBASIC6□□□□□ -1.45
Smc1aQ9CU62 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC6□□□□□ -1.45
Smc1aQ9CU62 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6□□□□□ -1.45
Smc1aQ9CU62 Gm18800-202ENSMUST00000188688 1105 ntBASIC6□□□□□ -1.45
Smc1aQ9CU62 Gm37073-201ENSMUST00000192469 1222 ntBASIC6□□□□□ -1.45
Smc1aQ9CU62 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC6□□□□□ -1.45
Smc1aQ9CU62 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 106.2 ms