Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 AC122327.2-201ENSMUST00000220883 120 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 AC122327.3-201ENSMUST00000221852 120 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 AC166341.1-201ENSMUST00000223360 105 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 AC138718.1-201ENSMUST00000225947 1009 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 AC160120.1-201ENSMUST00000227446 663 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm24763-201ENSMUST00000083688 190 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm44661-201ENSMUST00000208830 3503 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm38387-201ENSMUST00000191945 2577 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm6101-201ENSMUST00000195384 1867 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm14849-201ENSMUST00000122293 2846 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Gm23768-201ENSMUST00000104440 131 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Mir467h-201ENSMUST00000116759 121 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Gm16394-201ENSMUST00000117289 675 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Gm11445-201ENSMUST00000119101 532 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Gm25435-201ENSMUST00000158277 267 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Gm6900-201ENSMUST00000178971 342 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Gm25598-201ENSMUST00000179031 107 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Gm22252-201ENSMUST00000179316 79 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Mir7082-201ENSMUST00000183526 92 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Mir6348-201ENSMUST00000183804 120 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Gm21728-201ENSMUST00000188442 695 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Gm21889-201ENSMUST00000188487 695 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Gm21920-201ENSMUST00000190042 695 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Gm28620-201ENSMUST00000190463 439 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Igkv4-83-201ENSMUST00000196933 334 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Gm19653-201ENSMUST00000204326 1039 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Gm8999-201ENSMUST00000204951 969 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Gm5928-201ENSMUST00000221839 466 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 AC132260.1-201ENSMUST00000225499 734 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 AC123656.1-201ENSMUST00000227121 581 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 CT030238.4-203ENSMUST00000227343 836 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 AC144628.2-201ENSMUST00000227374 352 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 AC144798.1-201ENSMUST00000228120 391 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 AC133203.1-201ENSMUST00000228241 301 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 AC170810.1-201ENSMUST00000228267 672 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Gm23851-201ENSMUST00000083831 103 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Gm8822-201ENSMUST00000118948 2347 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim47Q8C0E3 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Gm37530-201ENSMUST00000191759 4932 ntBASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Gm38070-201ENSMUST00000191850 6480 ntBASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Gm14172-201ENSMUST00000118255 644 ntBASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Gm14870-201ENSMUST00000118414 156 ntBASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Gm12878-201ENSMUST00000118744 332 ntBASIC7.41□□□□□ -1.22
Trim47Q8C0E3 Gm5319-201ENSMUST00000118965 873 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms