Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.55□□□□□ -1.68
Rif1Q6PR54 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Rif1Q6PR54 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Rif1Q6PR54 Gm14610-201ENSMUST00000118358 966 ntBASIC4.55□□□□□ -1.68
Rif1Q6PR54 Gm6884-201ENSMUST00000119318 615 ntBASIC4.55□□□□□ -1.68
Rif1Q6PR54 Gm4487-201ENSMUST00000150617 442 ntBASIC4.55□□□□□ -1.68
Rif1Q6PR54 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC4.55□□□□□ -1.68
Rif1Q6PR54 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Rif1Q6PR54 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.55□□□□□ -1.68
Rif1Q6PR54 Gm21461-201ENSMUST00000200382 863 ntBASIC4.55□□□□□ -1.68
Rif1Q6PR54 Gm44833-201ENSMUST00000208368 331 ntBASIC4.55□□□□□ -1.68
Rif1Q6PR54 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Rif1Q6PR54 Gm18628-201ENSMUST00000220584 475 ntBASIC4.55□□□□□ -1.68
Rif1Q6PR54 AC134439.1-201ENSMUST00000220923 600 ntBASIC4.55□□□□□ -1.68
Rif1Q6PR54 AC211878.1-201ENSMUST00000221668 474 ntBASIC4.55□□□□□ -1.68
Rif1Q6PR54 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Rif1Q6PR54 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC4.55□□□□□ -1.68
Rif1Q6PR54 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Rif1Q6PR54 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Rif1Q6PR54 Gm6011-201ENSMUST00000211736 1796 ntBASIC4.55□□□□□ -1.68
Rif1Q6PR54 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
Rif1Q6PR54 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Rif1Q6PR54 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Rif1Q6PR54 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Rif1Q6PR54 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC4.54□□□□□ -1.68
Rif1Q6PR54 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm38082-201ENSMUST00000192800 6882 ntBASIC4.54□□□□□ -1.68
Rif1Q6PR54 AC159188.2-201ENSMUST00000224103 1301 ntBASIC4.54□□□□□ -1.68
Rif1Q6PR54 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm1866-201ENSMUST00000120701 477 ntBASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm25176-201ENSMUST00000122640 125 ntBASIC4.54□□□□□ -1.68
Rif1Q6PR54 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm18547-201ENSMUST00000192439 811 ntBASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm18717-201ENSMUST00000192744 1241 ntBASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC4.54□□□□□ -1.68
Rif1Q6PR54 AC153852.1-201ENSMUST00000217881 567 ntBASIC4.54□□□□□ -1.68
Rif1Q6PR54 Olfr1143-201ENSMUST00000090708 945 ntBASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Rif1Q6PR54 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Rif1Q6PR54 AC162467.3-201ENSMUST00000219716 2172 ntBASIC4.54□□□□□ -1.68
Rif1Q6PR54 AC107742.1-201ENSMUST00000227769 1390 ntBASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm37864-201ENSMUST00000195308 3075 ntBASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.54□□□□□ -1.68
Rif1Q6PR54 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm22119-201ENSMUST00000175594 99 ntBASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm27492-201ENSMUST00000185194 187 ntBASIC4.54□□□□□ -1.68
Rif1Q6PR54 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm44134-202ENSMUST00000204777 545 ntBASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm44580-201ENSMUST00000206333 877 ntBASIC4.54□□□□□ -1.68
Rif1Q6PR54 Olfr1309-201ENSMUST00000207885 964 ntBASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm45651-201ENSMUST00000210857 335 ntBASIC4.54□□□□□ -1.68
Rif1Q6PR54 AC121912.1-201ENSMUST00000227525 1201 ntBASIC4.54□□□□□ -1.68
Rif1Q6PR54 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Rif1Q6PR54 AC163032.1-201ENSMUST00000220671 2970 ntBASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm37621-201ENSMUST00000194716 5531 ntBASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC4.54□□□□□ -1.68
Rif1Q6PR54 Gm44441-201ENSMUST00000203642 2475 ntBASIC4.53□□□□□ -1.68
Rif1Q6PR54 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Rif1Q6PR54 Gm38299-201ENSMUST00000193214 3789 ntBASIC4.53□□□□□ -1.68
Rif1Q6PR54 Cmah-208ENSMUST00000224819 9482 ntBASIC4.53□□□□□ -1.68
Rif1Q6PR54 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC4.53□□□□□ -1.68
Rif1Q6PR54 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Rif1Q6PR54 Gm6650-201ENSMUST00000166710 614 ntBASIC4.53□□□□□ -1.68
Rif1Q6PR54 Gm3084-201ENSMUST00000169967 598 ntBASIC4.53□□□□□ -1.68
Rif1Q6PR54 Gm22177-201ENSMUST00000175002 158 ntBASIC4.53□□□□□ -1.68
Rif1Q6PR54 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Rif1Q6PR54 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Rif1Q6PR54 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.53□□□□□ -1.68
Rif1Q6PR54 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Rif1Q6PR54 Gm9309-201ENSMUST00000223537 546 ntBASIC4.53□□□□□ -1.68
Rif1Q6PR54 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Rif1Q6PR54 Mecom-201ENSMUST00000061088 348 ntBASIC4.53□□□□□ -1.68
Rif1Q6PR54 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Rif1Q6PR54 Gm26165-201ENSMUST00000083791 138 ntBASIC4.53□□□□□ -1.68
Rif1Q6PR54 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
Rif1Q6PR54 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms