Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 AC169985.1-201ENSMUST00000223648 2439 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Gm7269-201ENSMUST00000210819 1373 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Snord88a-201ENSMUST00000116723 90 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Gm15175-201ENSMUST00000117629 132 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Gm11843-201ENSMUST00000118984 425 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Gm13357-201ENSMUST00000120528 537 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Gm13808-201ENSMUST00000121353 184 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Gm12332-201ENSMUST00000121397 922 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Gm23810-201ENSMUST00000175150 74 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Gm25284-201ENSMUST00000180345 141 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 S100a11-ps-201ENSMUST00000181735 306 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Mir6367-201ENSMUST00000183385 102 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Gm8392-201ENSMUST00000185647 835 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Gm29650-201ENSMUST00000188485 742 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Gm38122-201ENSMUST00000192679 885 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Gm18900-201ENSMUST00000193218 584 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Gm18952-201ENSMUST00000194471 846 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Gm45246-201ENSMUST00000210820 367 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Gm7948-201ENSMUST00000212607 844 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 CT030030.1-201ENSMUST00000218809 152 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 AC134917.2-201ENSMUST00000223354 124 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 CT009515.3-201ENSMUST00000226509 671 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 AC105324.1-201ENSMUST00000227844 386 ntBASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.5□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm22710-201ENSMUST00000116892 125 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm15216-201ENSMUST00000118058 277 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm11624-201ENSMUST00000118579 1041 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm12242-201ENSMUST00000118824 738 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm13604-201ENSMUST00000119332 482 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm8757-201ENSMUST00000119660 372 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm15311-201ENSMUST00000119682 282 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm15305-201ENSMUST00000120354 288 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm13121-201ENSMUST00000120637 632 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm13162-201ENSMUST00000121481 454 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm23903-201ENSMUST00000157566 131 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm6808-201ENSMUST00000162341 807 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms