Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 AC166358.9-201ENSMUST00000220653 375 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Gm7768-201ENSMUST00000222988 597 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 AC163631.1-201ENSMUST00000225041 598 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 AC166574.3-201ENSMUST00000226725 367 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Gm24525-201ENSMUST00000082917 151 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Gm44675-201ENSMUST00000208188 2927 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.58□□□□□ -1.52
Upf3bQ3ULL6 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Gm13537-201ENSMUST00000120467 267 ntBASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Gm24175-201ENSMUST00000158931 129 ntBASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Gm25348-201ENSMUST00000158961 111 ntBASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Gm44307-201ENSMUST00000204466 764 ntBASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.57□□□□□ -1.52
Upf3bQ3ULL6 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Gm24170-201ENSMUST00000104124 133 ntBASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Gm24789-201ENSMUST00000104282 131 ntBASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Gm13887-201ENSMUST00000119009 344 ntBASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Gm11507-201ENSMUST00000156462 412 ntBASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Gm22895-201ENSMUST00000157508 308 ntBASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Gm22804-201ENSMUST00000158052 101 ntBASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Gm22420-201ENSMUST00000178795 126 ntBASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Gm28017-201ENSMUST00000183434 126 ntBASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Mir7037-201ENSMUST00000184414 65 ntBASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Gm29664-201ENSMUST00000191125 463 ntBASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 AV026068-231ENSMUST00000225862 482 ntBASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Gm24763-201ENSMUST00000083688 190 ntBASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Gm42520-201ENSMUST00000199642 1502 ntBASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.56□□□□□ -1.52
Upf3bQ3ULL6 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms