Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC8.33□□□□□ -1.08
Col17a1Q07563 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Col17a1Q07563 Gm23508-201ENSMUST00000083079 72 ntBASIC8.33□□□□□ -1.08
Col17a1Q07563 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col17a1Q07563 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Col17a1Q07563 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Col17a1Q07563 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC8.33□□□□□ -1.08
Col17a1Q07563 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col17a1Q07563 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Col17a1Q07563 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Col17a1Q07563 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC8.33□□□□□ -1.08
Col17a1Q07563 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC8.33□□□□□ -1.08
Col17a1Q07563 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Col17a1Q07563 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Col17a1Q07563 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Col17a1Q07563 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Col17a1Q07563 Gm22266-201ENSMUST00000104011 138 ntBASIC8.32□□□□□ -1.08
Col17a1Q07563 Gm25168-201ENSMUST00000104189 132 ntBASIC8.32□□□□□ -1.08
Col17a1Q07563 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col17a1Q07563 Gm14833-201ENSMUST00000118345 1027 ntBASIC8.32□□□□□ -1.08
Col17a1Q07563 Gm15206-201ENSMUST00000119143 454 ntBASIC8.32□□□□□ -1.08
Col17a1Q07563 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC8.32□□□□□ -1.08
Col17a1Q07563 Gm22986-201ENSMUST00000122753 130 ntBASIC8.32□□□□□ -1.08
Col17a1Q07563 Gm22985-201ENSMUST00000122754 116 ntBASIC8.32□□□□□ -1.08
Col17a1Q07563 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC8.32□□□□□ -1.08
Col17a1Q07563 Gm43489-201ENSMUST00000196810 993 ntBASIC8.32□□□□□ -1.08
Col17a1Q07563 Gm18462-201ENSMUST00000208112 417 ntBASIC8.32□□□□□ -1.08
Col17a1Q07563 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col17a1Q07563 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
Col17a1Q07563 AC154734.1-201ENSMUST00000219957 2141 ntBASIC8.32□□□□□ -1.08
Col17a1Q07563 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Col17a1Q07563 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC8.32□□□□□ -1.08
Col17a1Q07563 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col17a1Q07563 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Col17a1Q07563 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col17a1Q07563 Gm44697-201ENSMUST00000207756 1679 ntBASIC8.32□□□□□ -1.08
Col17a1Q07563 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col17a1Q07563 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Col17a1Q07563 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col17a1Q07563 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col17a1Q07563 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Col17a1Q07563 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC8.32□□□□□ -1.08
Col17a1Q07563 Gm38120-201ENSMUST00000195506 4642 ntBASIC8.32□□□□□ -1.08
Col17a1Q07563 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC8.32□□□□□ -1.08
Col17a1Q07563 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Col17a1Q07563 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Col17a1Q07563 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Col17a1Q07563 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Col17a1Q07563 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col17a1Q07563 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC8.32□□□□□ -1.08
Col17a1Q07563 Gm15719-201ENSMUST00000120619 635 ntBASIC8.32□□□□□ -1.08
Col17a1Q07563 Gm11925-201ENSMUST00000121375 535 ntBASIC8.32□□□□□ -1.08
Col17a1Q07563 Gm3084-201ENSMUST00000169967 598 ntBASIC8.32□□□□□ -1.08
Col17a1Q07563 Gm27414-201ENSMUST00000185033 381 ntBASIC8.32□□□□□ -1.08
Col17a1Q07563 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col17a1Q07563 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col17a1Q07563 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col17a1Q07563 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col17a1Q07563 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col17a1Q07563 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC8.32□□□□□ -1.08
Col17a1Q07563 Gm44681-201ENSMUST00000208447 842 ntBASIC8.32□□□□□ -1.08
Col17a1Q07563 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col17a1Q07563 Snora30-201ENSMUST00000083325 130 ntBASIC8.32□□□□□ -1.08
Col17a1Q07563 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Col17a1Q07563 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col17a1Q07563 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col17a1Q07563 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col17a1Q07563 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Col17a1Q07563 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Col17a1Q07563 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col17a1Q07563 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC8.31□□□□□ -1.08
Col17a1Q07563 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col17a1Q07563 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col17a1Q07563 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col17a1Q07563 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC8.31□□□□□ -1.08
Col17a1Q07563 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC8.31□□□□□ -1.08
Col17a1Q07563 Gm23839-201ENSMUST00000116957 109 ntBASIC8.31□□□□□ -1.08
Col17a1Q07563 Gm12281-201ENSMUST00000119536 298 ntBASIC8.31□□□□□ -1.08
Col17a1Q07563 Gm6079-201ENSMUST00000121356 404 ntBASIC8.31□□□□□ -1.08
Col17a1Q07563 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
Col17a1Q07563 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Col17a1Q07563 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col17a1Q07563 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC8.31□□□□□ -1.08
Col17a1Q07563 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col17a1Q07563 Gm18553-201ENSMUST00000194152 634 ntBASIC8.31□□□□□ -1.08
Col17a1Q07563 AC165283.1-201ENSMUST00000223390 307 ntBASIC8.31□□□□□ -1.08
Col17a1Q07563 AC174797.4-201ENSMUST00000225510 347 ntBASIC8.31□□□□□ -1.08
Col17a1Q07563 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC8.31□□□□□ -1.08
Col17a1Q07563 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col17a1Q07563 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Col17a1Q07563 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Col17a1Q07563 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col17a1Q07563 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC8.31□□□□□ -1.08
Col17a1Q07563 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
Col17a1Q07563 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col17a1Q07563 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Col17a1Q07563 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC8.3□□□□□ -1.08
Col17a1Q07563 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Col17a1Q07563 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col17a1Q07563 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms