Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Igkv4-73-201ENSMUST00000199760 358 ntBASIC4.97□□□□□ -1.61
Scn1bP97952 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC4.97□□□□□ -1.61
Scn1bP97952 Gm20997-201ENSMUST00000205148 231 ntBASIC4.97□□□□□ -1.61
Scn1bP97952 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC4.97□□□□□ -1.61
Scn1bP97952 Gm44972-201ENSMUST00000206419 406 ntBASIC4.97□□□□□ -1.61
Scn1bP97952 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC4.97□□□□□ -1.61
Scn1bP97952 Gm45724-201ENSMUST00000213031 420 ntBASIC4.97□□□□□ -1.61
Scn1bP97952 Gm18487-201ENSMUST00000215826 878 ntBASIC4.97□□□□□ -1.61
Scn1bP97952 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Scn1bP97952 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Scn1bP97952 Gm272-201ENSMUST00000222073 919 ntBASIC4.97□□□□□ -1.61
Scn1bP97952 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Scn1bP97952 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC4.97□□□□□ -1.61
Scn1bP97952 AC156559.1-201ENSMUST00000224158 222 ntBASIC4.97□□□□□ -1.61
Scn1bP97952 AC137871.3-201ENSMUST00000226628 225 ntBASIC4.97□□□□□ -1.61
Scn1bP97952 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Scn1bP97952 AC163664.2-201ENSMUST00000228894 459 ntBASIC4.97□□□□□ -1.61
Scn1bP97952 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scn1bP97952 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Scn1bP97952 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Scn1bP97952 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Scn1bP97952 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Scn1bP97952 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scn1bP97952 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC4.97□□□□□ -1.61
Scn1bP97952 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scn1bP97952 Gm20667-201ENSMUST00000175674 1930 ntBASIC4.97□□□□□ -1.61
Scn1bP97952 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scn1bP97952 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scn1bP97952 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC4.97□□□□□ -1.61
Scn1bP97952 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Scn1bP97952 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Scn1bP97952 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scn1bP97952 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scn1bP97952 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Scn1bP97952 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC4.96□□□□□ -1.61
Scn1bP97952 Gm43283-201ENSMUST00000199138 2548 ntBASIC4.96□□□□□ -1.61
Scn1bP97952 Gm43843-201ENSMUST00000202396 1587 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.96□□□□□ -1.62
Scn1bP97952 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Scn1bP97952 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Scn1bP97952 Mir449c-201ENSMUST00000102192 109 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Scn1bP97952 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Scn1bP97952 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Scn1bP97952 Gm7312-201ENSMUST00000118798 469 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 Gm14970-201ENSMUST00000122289 355 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 Gm15300-201ENSMUST00000122324 279 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 Gm25291-201ENSMUST00000122795 144 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC4.96□□□□□ -1.62
Scn1bP97952 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Scn1bP97952 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Scn1bP97952 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC4.96□□□□□ -1.62
Scn1bP97952 Gm22223-201ENSMUST00000157360 125 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 Samd15-201ENSMUST00000169669 1194 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC4.96□□□□□ -1.62
Scn1bP97952 Gm23872-201ENSMUST00000175432 77 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.96□□□□□ -1.62
Scn1bP97952 Mir6992-201ENSMUST00000183342 109 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 Vis1-201ENSMUST00000183957 201 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 Gm28527-201ENSMUST00000185210 297 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.96□□□□□ -1.62
Scn1bP97952 Gm29234-201ENSMUST00000187452 1262 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Scn1bP97952 Gm9127-201ENSMUST00000188041 985 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 Gm37492-201ENSMUST00000191948 376 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 Gm38330-201ENSMUST00000192743 959 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Scn1bP97952 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Scn1bP97952 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC4.96□□□□□ -1.62
Scn1bP97952 Gm5050-201ENSMUST00000197164 775 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 Gm44214-201ENSMUST00000204153 606 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Scn1bP97952 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Scn1bP97952 Gm19182-201ENSMUST00000207139 577 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC4.96□□□□□ -1.62
Scn1bP97952 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC4.96□□□□□ -1.62
Scn1bP97952 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC4.96□□□□□ -1.62
Scn1bP97952 AC156950.1-201ENSMUST00000219604 456 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 AC140209.1-204ENSMUST00000226736 739 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC4.96□□□□□ -1.62
Scn1bP97952 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Scn1bP97952 Olfr878-201ENSMUST00000086061 1065 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Scn1bP97952 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Scn1bP97952 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Scn1bP97952 AC122357.1-201ENSMUST00000221652 1515 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Scn1bP97952 Gm15394-201ENSMUST00000119656 1308 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC4.96□□□□□ -1.62
Scn1bP97952 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Scn1bP97952 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Scn1bP97952 Gm38189-201ENSMUST00000194495 1457 ntBASIC4.95□□□□□ -1.62
Scn1bP97952 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Scn1bP97952 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Scn1bP97952 Gm6503-201ENSMUST00000210829 2225 ntBASIC4.95□□□□□ -1.62
Scn1bP97952 Gm25345-201ENSMUST00000104505 133 ntBASIC4.95□□□□□ -1.62
Scn1bP97952 Gm12230-201ENSMUST00000118301 454 ntBASIC4.95□□□□□ -1.62
Scn1bP97952 Gm14580-201ENSMUST00000119122 718 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms