Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.9□□□□□ -1.46
CiitaP79621 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.9□□□□□ -1.46
CiitaP79621 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.9□□□□□ -1.46
CiitaP79621 CT954323.2-201ENSMUST00000222056 213 ntBASIC5.9□□□□□ -1.46
CiitaP79621 Gm6474-201ENSMUST00000223250 699 ntBASIC5.9□□□□□ -1.46
CiitaP79621 Gm8288-201ENSMUST00000223406 593 ntBASIC5.9□□□□□ -1.46
CiitaP79621 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CiitaP79621 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.9□□□□□ -1.46
CiitaP79621 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CiitaP79621 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.9□□□□□ -1.46
CiitaP79621 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CiitaP79621 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.9□□□□□ -1.46
CiitaP79621 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CiitaP79621 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.9□□□□□ -1.47
CiitaP79621 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.9□□□□□ -1.47
CiitaP79621 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CiitaP79621 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CiitaP79621 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
CiitaP79621 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CiitaP79621 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CiitaP79621 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CiitaP79621 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.89□□□□□ -1.47
CiitaP79621 Gm22273-201ENSMUST00000104040 132 ntBASIC5.89□□□□□ -1.47
CiitaP79621 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
CiitaP79621 Gm9429-201ENSMUST00000117804 868 ntBASIC5.89□□□□□ -1.47
CiitaP79621 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.89□□□□□ -1.47
CiitaP79621 Gm15803-201ENSMUST00000120118 394 ntBASIC5.89□□□□□ -1.47
CiitaP79621 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.89□□□□□ -1.47
CiitaP79621 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.89□□□□□ -1.47
CiitaP79621 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC5.89□□□□□ -1.47
CiitaP79621 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CiitaP79621 Gm8358-201ENSMUST00000167222 555 ntBASIC5.89□□□□□ -1.47
CiitaP79621 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.89□□□□□ -1.47
CiitaP79621 Gm7335-201ENSMUST00000172475 373 ntBASIC5.89□□□□□ -1.47
CiitaP79621 Gm10784-201ENSMUST00000178715 238 ntBASIC5.89□□□□□ -1.47
CiitaP79621 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CiitaP79621 Gm27541-201ENSMUST00000184078 122 ntBASIC5.89□□□□□ -1.47
CiitaP79621 Gm28683-201ENSMUST00000187134 615 ntBASIC5.89□□□□□ -1.47
CiitaP79621 Gm28840-205ENSMUST00000189320 615 ntBASIC5.89□□□□□ -1.47
CiitaP79621 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC5.89□□□□□ -1.47
CiitaP79621 Gm19029-201ENSMUST00000189923 564 ntBASIC5.89□□□□□ -1.47
CiitaP79621 Gm28835-203ENSMUST00000190062 615 ntBASIC5.89□□□□□ -1.47
CiitaP79621 Gm18717-201ENSMUST00000192744 1241 ntBASIC5.89□□□□□ -1.47
CiitaP79621 Gm8861-201ENSMUST00000196346 832 ntBASIC5.89□□□□□ -1.47
CiitaP79621 Gm33952-201ENSMUST00000197795 408 ntBASIC5.89□□□□□ -1.47
CiitaP79621 Igkv12-66-201ENSMUST00000199305 348 ntBASIC5.89□□□□□ -1.47
CiitaP79621 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CiitaP79621 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.89□□□□□ -1.47
CiitaP79621 AC138284.5-201ENSMUST00000214389 652 ntBASIC5.89□□□□□ -1.47
CiitaP79621 Gm32526-201ENSMUST00000221878 981 ntBASIC5.89□□□□□ -1.47
CiitaP79621 AC160120.1-201ENSMUST00000227446 663 ntBASIC5.89□□□□□ -1.47
CiitaP79621 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CiitaP79621 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CiitaP79621 Mir188-201ENSMUST00000083464 68 ntBASIC5.89□□□□□ -1.47
CiitaP79621 Gm25187-201ENSMUST00000083906 133 ntBASIC5.89□□□□□ -1.47
CiitaP79621 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CiitaP79621 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CiitaP79621 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CiitaP79621 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CiitaP79621 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.89□□□□□ -1.47
CiitaP79621 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CiitaP79621 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.89□□□□□ -1.47
CiitaP79621 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CiitaP79621 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CiitaP79621 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.89□□□□□ -1.47
CiitaP79621 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.88□□□□□ -1.47
CiitaP79621 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CiitaP79621 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CiitaP79621 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CiitaP79621 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.88□□□□□ -1.47
CiitaP79621 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CiitaP79621 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CiitaP79621 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CiitaP79621 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CiitaP79621 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.88□□□□□ -1.47
CiitaP79621 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CiitaP79621 Gm12813-201ENSMUST00000119615 902 ntBASIC5.88□□□□□ -1.47
CiitaP79621 Gm11866-201ENSMUST00000120209 335 ntBASIC5.88□□□□□ -1.47
CiitaP79621 Scarna13-201ENSMUST00000158164 275 ntBASIC5.88□□□□□ -1.47
CiitaP79621 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC5.88□□□□□ -1.47
CiitaP79621 Gm8256-201ENSMUST00000169178 453 ntBASIC5.88□□□□□ -1.47
CiitaP79621 Gm20519-201ENSMUST00000173684 359 ntBASIC5.88□□□□□ -1.47
CiitaP79621 Gm21909-201ENSMUST00000178260 439 ntBASIC5.88□□□□□ -1.47
CiitaP79621 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CiitaP79621 Gm8581-201ENSMUST00000188636 890 ntBASIC5.88□□□□□ -1.47
CiitaP79621 Gm4322-201ENSMUST00000191094 336 ntBASIC5.88□□□□□ -1.47
CiitaP79621 Gm7496-201ENSMUST00000192573 1034 ntBASIC5.88□□□□□ -1.47
CiitaP79621 Gm37102-201ENSMUST00000195740 1105 ntBASIC5.88□□□□□ -1.47
CiitaP79621 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CiitaP79621 Gm44237-201ENSMUST00000205183 936 ntBASIC5.88□□□□□ -1.47
CiitaP79621 Gm17984-201ENSMUST00000205286 859 ntBASIC5.88□□□□□ -1.47
CiitaP79621 Gm18468-201ENSMUST00000207321 369 ntBASIC5.88□□□□□ -1.47
CiitaP79621 Gm18470-201ENSMUST00000207467 420 ntBASIC5.88□□□□□ -1.47
CiitaP79621 Gm18465-201ENSMUST00000207468 369 ntBASIC5.88□□□□□ -1.47
CiitaP79621 Gm18464-201ENSMUST00000207803 420 ntBASIC5.88□□□□□ -1.47
CiitaP79621 Gm18458-201ENSMUST00000207908 369 ntBASIC5.88□□□□□ -1.47
CiitaP79621 Gm18461-201ENSMUST00000208421 420 ntBASIC5.88□□□□□ -1.47
CiitaP79621 Gm44582-201ENSMUST00000209125 445 ntBASIC5.88□□□□□ -1.47
CiitaP79621 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CiitaP79621 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms