Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC5.7□□□□□ -1.5
Tpm1P58771 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Tpm1P58771 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Tpm1P58771 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Tpm1P58771 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.69□□□□□ -1.5
Tpm1P58771 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Tpm1P58771 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.69□□□□□ -1.5
Tpm1P58771 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tpm1P58771 Gm22266-201ENSMUST00000104011 138 ntBASIC5.69□□□□□ -1.5
Tpm1P58771 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Tpm1P58771 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.69□□□□□ -1.5
Tpm1P58771 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.69□□□□□ -1.5
Tpm1P58771 Gm13195-201ENSMUST00000117229 261 ntBASIC5.69□□□□□ -1.5
Tpm1P58771 Gm23211-201ENSMUST00000122717 308 ntBASIC5.69□□□□□ -1.5
Tpm1P58771 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.69□□□□□ -1.5
Tpm1P58771 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Tpm1P58771 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Tpm1P58771 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.69□□□□□ -1.5
Tpm1P58771 Gm22724-201ENSMUST00000158091 127 ntBASIC5.69□□□□□ -1.5
Tpm1P58771 Gm22361-201ENSMUST00000158435 176 ntBASIC5.69□□□□□ -1.5
Tpm1P58771 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tpm1P58771 Gm17137-202ENSMUST00000165729 957 ntBASIC5.69□□□□□ -1.5
Tpm1P58771 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tpm1P58771 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Tpm1P58771 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC5.69□□□□□ -1.5
Tpm1P58771 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Tpm1P58771 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Tpm1P58771 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tpm1P58771 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Tpm1P58771 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tpm1P58771 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.69□□□□□ -1.5
Tpm1P58771 Gm18342-201ENSMUST00000186987 694 ntBASIC5.69□□□□□ -1.5
Tpm1P58771 Gm21617-201ENSMUST00000188297 691 ntBASIC5.69□□□□□ -1.5
Tpm1P58771 Gm2427-201ENSMUST00000189121 881 ntBASIC5.69□□□□□ -1.5
Tpm1P58771 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tpm1P58771 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tpm1P58771 Gm37517-201ENSMUST00000194004 1289 ntBASIC5.69□□□□□ -1.5
Tpm1P58771 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.69□□□□□ -1.5
Tpm1P58771 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.69□□□□□ -1.5
Tpm1P58771 Gm8288-201ENSMUST00000223406 593 ntBASIC5.69□□□□□ -1.5
Tpm1P58771 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.69□□□□□ -1.5
Tpm1P58771 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tpm1P58771 Olfr519-201ENSMUST00000084752 960 ntBASIC5.69□□□□□ -1.5
Tpm1P58771 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC5.69□□□□□ -1.5
Tpm1P58771 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC5.69□□□□□ -1.5
Tpm1P58771 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Tpm1P58771 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Tpm1P58771 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Tpm1P58771 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.69□□□□□ -1.5
Tpm1P58771 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.69□□□□□ -1.5
Tpm1P58771 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Tpm1P58771 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tpm1P58771 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.69□□□□□ -1.5
Tpm1P58771 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.69□□□□□ -1.5
Tpm1P58771 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.68□□□□□ -1.5
Tpm1P58771 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Tpm1P58771 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.68□□□□□ -1.5
Tpm1P58771 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Tpm1P58771 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Tpm1P58771 Gm23746-201ENSMUST00000104229 125 ntBASIC5.68□□□□□ -1.5
Tpm1P58771 Gm14086-201ENSMUST00000117152 173 ntBASIC5.68□□□□□ -1.5
Tpm1P58771 Gm13013-201ENSMUST00000119087 523 ntBASIC5.68□□□□□ -1.5
Tpm1P58771 Gm13259-201ENSMUST00000120792 456 ntBASIC5.68□□□□□ -1.5
Tpm1P58771 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC5.68□□□□□ -1.5
Tpm1P58771 Gm26489-201ENSMUST00000157880 264 ntBASIC5.68□□□□□ -1.5
Tpm1P58771 Gm23318-201ENSMUST00000158000 108 ntBASIC5.68□□□□□ -1.5
Tpm1P58771 Scarna13-201ENSMUST00000158164 275 ntBASIC5.68□□□□□ -1.5
Tpm1P58771 Gm23386-201ENSMUST00000158585 144 ntBASIC5.68□□□□□ -1.5
Tpm1P58771 Gm3216-201ENSMUST00000166927 486 ntBASIC5.68□□□□□ -1.5
Tpm1P58771 Gm3141-201ENSMUST00000168726 499 ntBASIC5.68□□□□□ -1.5
Tpm1P58771 Gm21959-201ENSMUST00000178439 452 ntBASIC5.68□□□□□ -1.5
Tpm1P58771 Gm18558-201ENSMUST00000186253 1214 ntBASIC5.68□□□□□ -1.5
Tpm1P58771 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC5.68□□□□□ -1.5
Tpm1P58771 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC5.68□□□□□ -1.5
Tpm1P58771 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Tpm1P58771 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC5.68□□□□□ -1.5
Tpm1P58771 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Tpm1P58771 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Tpm1P58771 Gm44422-201ENSMUST00000204142 1025 ntBASIC5.68□□□□□ -1.5
Tpm1P58771 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC5.68□□□□□ -1.5
Tpm1P58771 Gm2961-201ENSMUST00000211074 772 ntBASIC5.68□□□□□ -1.5
Tpm1P58771 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Tpm1P58771 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Tpm1P58771 AC122295.1-201ENSMUST00000223476 388 ntBASIC5.68□□□□□ -1.5
Tpm1P58771 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.68□□□□□ -1.5
Tpm1P58771 AC131997.2-201ENSMUST00000227452 362 ntBASIC5.68□□□□□ -1.5
Tpm1P58771 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Tpm1P58771 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Tpm1P58771 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Tpm1P58771 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Tpm1P58771 Mir20a-201ENSMUST00000083508 107 ntBASIC5.68□□□□□ -1.5
Tpm1P58771 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.68□□□□□ -1.5
Tpm1P58771 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Tpm1P58771 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Tpm1P58771 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Tpm1P58771 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Tpm1P58771 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.67□□□□□ -1.5
Tpm1P58771 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Tpm1P58771 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Tpm1P58771 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms