Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Gm27985-201ENSMUST00000185112 378 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Gm28976-201ENSMUST00000188070 144 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC6.63□□□□□ -1.35
Sox1P53783 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Gm8860-201ENSMUST00000193160 445 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Gm37889-201ENSMUST00000194174 251 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Gm19057-201ENSMUST00000194329 1197 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC6.63□□□□□ -1.35
Sox1P53783 Gm43276-201ENSMUST00000199712 364 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Gm43456-201ENSMUST00000202519 457 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Sox1P53783 Gm18469-201ENSMUST00000208850 439 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Gm17994-201ENSMUST00000209260 533 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Gm45400-201ENSMUST00000211603 653 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Gm45344-201ENSMUST00000211610 341 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Sox1P53783 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Sox1P53783 AC115891.1-201ENSMUST00000215798 1755 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Gm7045-201ENSMUST00000221466 605 ntBASIC6.63□□□□□ -1.35
Sox1P53783 AC117237.1-201ENSMUST00000224035 395 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox1P53783 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox1P53783 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Sox1P53783 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Sox1P53783 Mir375-201ENSMUST00000083682 64 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Sox1P53783 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Sox1P53783 Gm42611-201ENSMUST00000199446 3407 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Sox1P53783 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.63□□□□□ -1.35
Sox1P53783 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.63□□□□□ -1.35
Sox1P53783 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC6.62□□□□□ -1.35
Sox1P53783 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6.62□□□□□ -1.35
Sox1P53783 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC6.62□□□□□ -1.35
Sox1P53783 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.62□□□□□ -1.35
Sox1P53783 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Sox1P53783 Gm11869-201ENSMUST00000118701 329 ntBASIC6.62□□□□□ -1.35
Sox1P53783 Gm13865-201ENSMUST00000120957 865 ntBASIC6.62□□□□□ -1.35
Sox1P53783 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC6.62□□□□□ -1.35
Sox1P53783 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 Gm26037-201ENSMUST00000158150 311 ntBASIC6.62□□□□□ -1.35
Sox1P53783 Gm23352-201ENSMUST00000158428 64 ntBASIC6.62□□□□□ -1.35
Sox1P53783 Gm3091-201ENSMUST00000163408 484 ntBASIC6.62□□□□□ -1.35
Sox1P53783 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Sox1P53783 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC6.62□□□□□ -1.35
Sox1P53783 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC6.62□□□□□ -1.35
Sox1P53783 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Sox1P53783 Gm18448-201ENSMUST00000186286 599 ntBASIC6.62□□□□□ -1.35
Sox1P53783 Gm29563-201ENSMUST00000187249 496 ntBASIC6.62□□□□□ -1.35
Sox1P53783 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC6.62□□□□□ -1.35
Sox1P53783 Gm37209-201ENSMUST00000194109 1276 ntBASIC6.62□□□□□ -1.35
Sox1P53783 Gm5034-201ENSMUST00000199115 634 ntBASIC6.62□□□□□ -1.35
Sox1P53783 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC6.62□□□□□ -1.35
Sox1P53783 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC6.62□□□□□ -1.35
Sox1P53783 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC6.62□□□□□ -1.35
Sox1P53783 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.62□□□□□ -1.35
Sox1P53783 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.62□□□□□ -1.35
Sox1P53783 AC155314.1-201ENSMUST00000227624 508 ntBASIC6.62□□□□□ -1.35
Sox1P53783 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Sox1P53783 Gm25578-201ENSMUST00000083406 104 ntBASIC6.62□□□□□ -1.35
Sox1P53783 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Sox1P53783 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC6.62□□□□□ -1.35
Sox1P53783 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC6.62□□□□□ -1.35
Sox1P53783 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 CT009480.2-201ENSMUST00000225152 3369 ntBASIC6.62□□□□□ -1.35
Sox1P53783 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Sox1P53783 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Sox1P53783 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC6.62□□□□□ -1.35
Sox1P53783 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Sox1P53783 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Sox1P53783 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 Grik1-210ENSMUST00000228034 2708 ntBASIC6.62□□□□□ -1.35
Sox1P53783 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sox1P53783 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Sox1P53783 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Sox1P53783 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox1P53783 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms