Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm13359-201ENSMUST00000119000 695 ntBASIC5.81□□□□□ -1.48
LdlrP35951 Gm11227-201ENSMUST00000119774 471 ntBASIC5.81□□□□□ -1.48
LdlrP35951 Gm13118-201ENSMUST00000120402 549 ntBASIC5.81□□□□□ -1.48
LdlrP35951 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC5.81□□□□□ -1.48
LdlrP35951 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC5.81□□□□□ -1.48
LdlrP35951 Gm22311-201ENSMUST00000158006 110 ntBASIC5.81□□□□□ -1.48
LdlrP35951 Gm25363-201ENSMUST00000158850 245 ntBASIC5.81□□□□□ -1.48
LdlrP35951 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
LdlrP35951 Gm6650-201ENSMUST00000166710 614 ntBASIC5.81□□□□□ -1.48
LdlrP35951 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC5.81□□□□□ -1.48
LdlrP35951 Gm26933-201ENSMUST00000182320 827 ntBASIC5.81□□□□□ -1.48
LdlrP35951 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC5.81□□□□□ -1.48
LdlrP35951 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.81□□□□□ -1.48
LdlrP35951 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC5.81□□□□□ -1.48
LdlrP35951 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LdlrP35951 Gm38131-201ENSMUST00000192449 430 ntBASIC5.81□□□□□ -1.48
LdlrP35951 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.81□□□□□ -1.48
LdlrP35951 Gm44727-201ENSMUST00000204225 451 ntBASIC5.81□□□□□ -1.48
LdlrP35951 Gm8209-201ENSMUST00000206386 553 ntBASIC5.81□□□□□ -1.48
LdlrP35951 Gm19033-201ENSMUST00000208516 964 ntBASIC5.81□□□□□ -1.48
LdlrP35951 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC5.81□□□□□ -1.48
LdlrP35951 AC153975.1-201ENSMUST00000220087 926 ntBASIC5.81□□□□□ -1.48
LdlrP35951 Gm18405-201ENSMUST00000220743 511 ntBASIC5.81□□□□□ -1.48
LdlrP35951 Gm9973-202ENSMUST00000220926 166 ntBASIC5.81□□□□□ -1.48
LdlrP35951 Gm18592-201ENSMUST00000221529 276 ntBASIC5.81□□□□□ -1.48
LdlrP35951 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.81□□□□□ -1.48
LdlrP35951 AC122034.1-201ENSMUST00000227641 595 ntBASIC5.81□□□□□ -1.48
LdlrP35951 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
LdlrP35951 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LdlrP35951 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LdlrP35951 Gm24200-201ENSMUST00000082955 157 ntBASIC5.81□□□□□ -1.48
LdlrP35951 Gm22043-201ENSMUST00000082993 158 ntBASIC5.81□□□□□ -1.48
LdlrP35951 Gm25515-201ENSMUST00000083858 157 ntBASIC5.81□□□□□ -1.48
LdlrP35951 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
LdlrP35951 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
LdlrP35951 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
LdlrP35951 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
LdlrP35951 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC5.81□□□□□ -1.48
LdlrP35951 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
LdlrP35951 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
LdlrP35951 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LdlrP35951 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
LdlrP35951 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.81□□□□□ -1.48
LdlrP35951 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
LdlrP35951 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
LdlrP35951 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LdlrP35951 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LdlrP35951 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LdlrP35951 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
LdlrP35951 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
LdlrP35951 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.8□□□□□ -1.48
LdlrP35951 Gm37127-201ENSMUST00000192924 3036 ntBASIC5.8□□□□□ -1.48
LdlrP35951 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.8□□□□□ -1.48
LdlrP35951 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
LdlrP35951 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LdlrP35951 Gm7205-201ENSMUST00000196032 1323 ntBASIC5.8□□□□□ -1.48
LdlrP35951 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LdlrP35951 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
LdlrP35951 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.8□□□□□ -1.48
LdlrP35951 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.8□□□□□ -1.48
LdlrP35951 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LdlrP35951 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LdlrP35951 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
LdlrP35951 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
LdlrP35951 Gm6913-201ENSMUST00000100019 348 ntBASIC5.8□□□□□ -1.48
LdlrP35951 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
LdlrP35951 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
LdlrP35951 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
LdlrP35951 Gm13770-201ENSMUST00000117149 305 ntBASIC5.8□□□□□ -1.48
LdlrP35951 Gm15185-201ENSMUST00000117397 746 ntBASIC5.8□□□□□ -1.48
LdlrP35951 Gm13428-201ENSMUST00000117540 365 ntBASIC5.8□□□□□ -1.48
LdlrP35951 Gm14788-201ENSMUST00000119457 375 ntBASIC5.8□□□□□ -1.48
LdlrP35951 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LdlrP35951 Gm3160-201ENSMUST00000128343 607 ntBASIC5.8□□□□□ -1.48
LdlrP35951 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC5.8□□□□□ -1.48
LdlrP35951 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.8□□□□□ -1.48
LdlrP35951 Gm23279-201ENSMUST00000157912 97 ntBASIC5.8□□□□□ -1.48
LdlrP35951 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
LdlrP35951 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.8□□□□□ -1.48
LdlrP35951 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC5.8□□□□□ -1.48
LdlrP35951 Gm18199-201ENSMUST00000173820 835 ntBASIC5.8□□□□□ -1.48
LdlrP35951 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.8□□□□□ -1.48
LdlrP35951 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC5.8□□□□□ -1.48
LdlrP35951 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
LdlrP35951 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
LdlrP35951 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC5.8□□□□□ -1.48
LdlrP35951 Gm8151-201ENSMUST00000184817 871 ntBASIC5.8□□□□□ -1.48
LdlrP35951 Gm28080-201ENSMUST00000188552 722 ntBASIC5.8□□□□□ -1.48
LdlrP35951 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LdlrP35951 Gm8419-201ENSMUST00000189886 412 ntBASIC5.8□□□□□ -1.48
LdlrP35951 Gm37609-201ENSMUST00000191778 678 ntBASIC5.8□□□□□ -1.48
LdlrP35951 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.8□□□□□ -1.48
LdlrP35951 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
LdlrP35951 Gm8929-201ENSMUST00000197781 1132 ntBASIC5.8□□□□□ -1.48
LdlrP35951 Gm7733-201ENSMUST00000199038 919 ntBASIC5.8□□□□□ -1.48
LdlrP35951 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
LdlrP35951 Gm8035-201ENSMUST00000204625 687 ntBASIC5.8□□□□□ -1.48
LdlrP35951 Gm45026-201ENSMUST00000205292 833 ntBASIC5.8□□□□□ -1.48
LdlrP35951 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LdlrP35951 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms