Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp4P35123 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Usp4P35123 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Usp4P35123 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Usp4P35123 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Usp4P35123 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Usp4P35123 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
Usp4P35123 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Usp4P35123 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp4P35123 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC6.26□□□□□ -1.41
Usp4P35123 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp4P35123 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Usp4P35123 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Usp4P35123 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.26□□□□□ -1.41
Usp4P35123 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp4P35123 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Usp4P35123 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC6.26□□□□□ -1.41
Usp4P35123 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Usp4P35123 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Usp4P35123 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Usp4P35123 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Usp4P35123 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Usp4P35123 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Usp4P35123 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Usp4P35123 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Usp4P35123 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Usp4P35123 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Usp4P35123 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Usp4P35123 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Usp4P35123 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Usp4P35123 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Usp4P35123 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.25□□□□□ -1.41
Usp4P35123 Gm12985-201ENSMUST00000118376 183 ntBASIC6.25□□□□□ -1.41
Usp4P35123 H3f3c-201ENSMUST00000119459 411 ntBASIC6.25□□□□□ -1.41
Usp4P35123 Gm12322-201ENSMUST00000121605 389 ntBASIC6.25□□□□□ -1.41
Usp4P35123 Gm14383-201ENSMUST00000121637 386 ntBASIC6.25□□□□□ -1.41
Usp4P35123 Gm4789-201ENSMUST00000121708 1216 ntBASIC6.25□□□□□ -1.41
Usp4P35123 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC6.25□□□□□ -1.41
Usp4P35123 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC6.25□□□□□ -1.41
Usp4P35123 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC6.25□□□□□ -1.41
Usp4P35123 Gm25669-201ENSMUST00000157699 112 ntBASIC6.25□□□□□ -1.41
Usp4P35123 Gm23343-201ENSMUST00000158964 143 ntBASIC6.25□□□□□ -1.41
Usp4P35123 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Usp4P35123 Gm3076-201ENSMUST00000161613 451 ntBASIC6.25□□□□□ -1.41
Usp4P35123 Spanxn4-201ENSMUST00000172433 424 ntBASIC6.25□□□□□ -1.41
Usp4P35123 Gm22548-201ENSMUST00000174899 78 ntBASIC6.25□□□□□ -1.41
Usp4P35123 Gm29519-201ENSMUST00000186994 398 ntBASIC6.25□□□□□ -1.41
Usp4P35123 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC6.25□□□□□ -1.41
Usp4P35123 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC6.25□□□□□ -1.41
Usp4P35123 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC6.25□□□□□ -1.41
Usp4P35123 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.25□□□□□ -1.41
Usp4P35123 Gm17952-201ENSMUST00000193914 747 ntBASIC6.25□□□□□ -1.41
Usp4P35123 Gm18805-201ENSMUST00000206872 655 ntBASIC6.25□□□□□ -1.41
Usp4P35123 Gm6230-201ENSMUST00000208077 780 ntBASIC6.25□□□□□ -1.41
Usp4P35123 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC6.25□□□□□ -1.41
Usp4P35123 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.25□□□□□ -1.41
Usp4P35123 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC6.25□□□□□ -1.41
Usp4P35123 CT009550.5-201ENSMUST00000226286 382 ntBASIC6.25□□□□□ -1.41
Usp4P35123 CT009515.3-201ENSMUST00000226509 671 ntBASIC6.25□□□□□ -1.41
Usp4P35123 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Usp4P35123 Gm8526-201ENSMUST00000079153 475 ntBASIC6.25□□□□□ -1.41
Usp4P35123 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Usp4P35123 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Usp4P35123 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Usp4P35123 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Usp4P35123 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Usp4P35123 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Usp4P35123 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Usp4P35123 Gm44220-201ENSMUST00000203784 2487 ntBASIC6.25□□□□□ -1.41
Usp4P35123 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Usp4P35123 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Usp4P35123 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.25□□□□□ -1.41
Usp4P35123 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Usp4P35123 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Usp4P35123 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Usp4P35123 AC154612.1-202ENSMUST00000224806 1725 ntBASIC6.25□□□□□ -1.41
Usp4P35123 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Usp4P35123 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Usp4P35123 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Usp4P35123 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp4P35123 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp4P35123 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp4P35123 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp4P35123 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp4P35123 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.24□□□□□ -1.41
Usp4P35123 Gm38190-201ENSMUST00000192350 4755 ntBASIC6.24□□□□□ -1.41
Usp4P35123 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Usp4P35123 Gm23294-201ENSMUST00000104150 164 ntBASIC6.24□□□□□ -1.41
Usp4P35123 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Usp4P35123 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC6.24□□□□□ -1.41
Usp4P35123 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC6.24□□□□□ -1.41
Usp4P35123 Gm13902-201ENSMUST00000120168 605 ntBASIC6.24□□□□□ -1.41
Usp4P35123 Gm13080-201ENSMUST00000120556 420 ntBASIC6.24□□□□□ -1.41
Usp4P35123 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC6.24□□□□□ -1.41
Usp4P35123 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Usp4P35123 Gm26393-201ENSMUST00000157625 129 ntBASIC6.24□□□□□ -1.41
Usp4P35123 Gm24687-201ENSMUST00000157758 241 ntBASIC6.24□□□□□ -1.41
Usp4P35123 Gm26162-201ENSMUST00000157793 132 ntBASIC6.24□□□□□ -1.41
Usp4P35123 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Usp4P35123 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms