Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Map2-207ENSMUST00000114018 5303 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Gm15385-201ENSMUST00000118725 667 ntBASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Gm11761-201ENSMUST00000121392 445 ntBASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Gm23743-201ENSMUST00000157389 274 ntBASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Gm23782-201ENSMUST00000157939 120 ntBASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Gm15790-201ENSMUST00000161109 1251 ntBASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 AC098742.1-201ENSMUST00000227945 373 ntBASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Gm44697-201ENSMUST00000207756 1679 ntBASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Helz2-201ENSMUST00000094203 9162 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Gm37023-201ENSMUST00000192895 2426 ntBASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Gm14158-201ENSMUST00000118409 308 ntBASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Gm11227-201ENSMUST00000119774 471 ntBASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Gm28655-201ENSMUST00000191538 692 ntBASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 AC124732.4-201ENSMUST00000220930 1274 ntBASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 4933427D14Rik-202ENSMUST00000108506 4732 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a3E9PWQ3 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 C78859-201ENSMUST00000212800 5943 ntBASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Gm22235-201ENSMUST00000157085 110 ntBASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Gm6872-201ENSMUST00000165001 700 ntBASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Gm26828-201ENSMUST00000180640 172 ntBASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Gm8911-201ENSMUST00000213986 652 ntBASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Gm5265-201ENSMUST00000076828 342 ntBASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Prickle2-201ENSMUST00000032093 7754 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Adgrl2-214ENSMUST00000199238 4670 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 CT025556.1-201ENSMUST00000222965 1884 ntBASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Gm13367-201ENSMUST00000119955 796 ntBASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Gm6265-201ENSMUST00000149263 231 ntBASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Gm23959-201ENSMUST00000157208 324 ntBASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Gm27940-201ENSMUST00000184449 98 ntBASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Gm5285-201ENSMUST00000193089 666 ntBASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Gm5750-201ENSMUST00000218711 801 ntBASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Gm3213-201ENSMUST00000219296 441 ntBASIC4.98□□□□□ -1.61
Col6a3E9PWQ3 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col6a3E9PWQ3 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a3E9PWQ3 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a3E9PWQ3 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a3E9PWQ3 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a3E9PWQ3 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a3E9PWQ3 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC4.97□□□□□ -1.61
Col6a3E9PWQ3 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a3E9PWQ3 Gm15400-201ENSMUST00000118944 601 ntBASIC4.97□□□□□ -1.61
Col6a3E9PWQ3 Gm16300-201ENSMUST00000160031 1279 ntBASIC4.97□□□□□ -1.61
Col6a3E9PWQ3 Mir6344-201ENSMUST00000183462 104 ntBASIC4.97□□□□□ -1.61
Col6a3E9PWQ3 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a3E9PWQ3 Gm29747-201ENSMUST00000194764 585 ntBASIC4.97□□□□□ -1.61
Col6a3E9PWQ3 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a3E9PWQ3 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col6a3E9PWQ3 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a3E9PWQ3 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Col6a3E9PWQ3 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a3E9PWQ3 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.97□□□□□ -1.61
Col6a3E9PWQ3 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a3E9PWQ3 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC4.97□□□□□ -1.61
Col6a3E9PWQ3 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a3E9PWQ3 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a3E9PWQ3 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms