Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm16254-201ENSMUST00000131528 730 ntBASIC5.37□□□□□ -1.55
Scn1aA2APX8 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Scn1aA2APX8 Gm26318-201ENSMUST00000176507 96 ntBASIC5.37□□□□□ -1.55
Scn1aA2APX8 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Scn1aA2APX8 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Scn1aA2APX8 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Scn1aA2APX8 Mir17-201ENSMUST00000083574 84 ntBASIC5.37□□□□□ -1.55
Scn1aA2APX8 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Scn1aA2APX8 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Scn1aA2APX8 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.37□□□□□ -1.55
Scn1aA2APX8 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Scn1aA2APX8 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.37□□□□□ -1.55
Scn1aA2APX8 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC5.37□□□□□ -1.55
Scn1aA2APX8 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Scn1aA2APX8 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Scn1aA2APX8 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Scn1aA2APX8 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Scn1aA2APX8 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.37□□□□□ -1.55
Scn1aA2APX8 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Scn1aA2APX8 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Gm2199-201ENSMUST00000119065 874 ntBASIC5.36□□□□□ -1.55
Scn1aA2APX8 Gm11790-201ENSMUST00000119569 455 ntBASIC5.36□□□□□ -1.55
Scn1aA2APX8 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.36□□□□□ -1.55
Scn1aA2APX8 Gm25603-201ENSMUST00000158361 105 ntBASIC5.36□□□□□ -1.55
Scn1aA2APX8 Olfr331-202ENSMUST00000170501 957 ntBASIC5.36□□□□□ -1.55
Scn1aA2APX8 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.36□□□□□ -1.55
Scn1aA2APX8 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC5.36□□□□□ -1.55
Scn1aA2APX8 AC124549.1-201ENSMUST00000225912 333 ntBASIC5.36□□□□□ -1.55
Scn1aA2APX8 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.36□□□□□ -1.55
Scn1aA2APX8 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Gm13854-201ENSMUST00000121183 1679 ntBASIC5.36□□□□□ -1.55
Scn1aA2APX8 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC5.36□□□□□ -1.55
Scn1aA2APX8 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.36□□□□□ -1.55
Scn1aA2APX8 Gm17081-201ENSMUST00000167363 478 ntBASIC5.36□□□□□ -1.55
Scn1aA2APX8 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Scn1aA2APX8 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.36□□□□□ -1.55
Scn1aA2APX8 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.36□□□□□ -1.55
Scn1aA2APX8 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Gm6776-201ENSMUST00000057752 900 ntBASIC5.36□□□□□ -1.55
Scn1aA2APX8 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scn1aA2APX8 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Scn1aA2APX8 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.35□□□□□ -1.55
Scn1aA2APX8 AC131687.1-201ENSMUST00000225931 5446 ntBASIC5.35□□□□□ -1.55
Scn1aA2APX8 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.35□□□□□ -1.55
Scn1aA2APX8 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1aA2APX8 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Scn1aA2APX8 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Scn1aA2APX8 Gm16060-201ENSMUST00000153140 478 ntBASIC5.35□□□□□ -1.55
Scn1aA2APX8 Gm24188-201ENSMUST00000157980 108 ntBASIC5.35□□□□□ -1.55
Scn1aA2APX8 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1aA2APX8 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.35□□□□□ -1.55
Scn1aA2APX8 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1aA2APX8 Gm8999-201ENSMUST00000204951 969 ntBASIC5.35□□□□□ -1.55
Scn1aA2APX8 Gm44820-201ENSMUST00000207420 396 ntBASIC5.35□□□□□ -1.55
Scn1aA2APX8 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1aA2APX8 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1aA2APX8 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Scn1aA2APX8 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Scn1aA2APX8 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Scn1aA2APX8 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.35□□□□□ -1.55
Scn1aA2APX8 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.35□□□□□ -1.55
Scn1aA2APX8 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Scn1aA2APX8 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.35□□□□□ -1.55
Scn1aA2APX8 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1aA2APX8 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.35□□□□□ -1.55
Scn1aA2APX8 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.35□□□□□ -1.55
Scn1aA2APX8 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Scn1aA2APX8 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1aA2APX8 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
Scn1aA2APX8 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Scn1aA2APX8 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1aA2APX8 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.35□□□□□ -1.55
Scn1aA2APX8 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1aA2APX8 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms