Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm18215-201ENSMUST00000204429 798 ntBASIC5.46□□□□□ -1.54
Chmp2aQ9DB34 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Chmp2aQ9DB34 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.46□□□□□ -1.54
Chmp2aQ9DB34 Gm36501-201ENSMUST00000221857 745 ntBASIC5.46□□□□□ -1.54
Chmp2aQ9DB34 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Chmp2aQ9DB34 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Chmp2aQ9DB34 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC5.46□□□□□ -1.54
Chmp2aQ9DB34 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Chmp2aQ9DB34 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Chmp2aQ9DB34 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Chmp2aQ9DB34 Gm37086-201ENSMUST00000193082 3452 ntBASIC5.46□□□□□ -1.54
Chmp2aQ9DB34 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.46□□□□□ -1.54
Chmp2aQ9DB34 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Chmp2aQ9DB34 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Chmp2aQ9DB34 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Chmp2aQ9DB34 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Chmp2aQ9DB34 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Chmp2aQ9DB34 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Chmp2aQ9DB34 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Chmp2aQ9DB34 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Chmp2aQ9DB34 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
Chmp2aQ9DB34 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.46□□□□□ -1.54
Chmp2aQ9DB34 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.46□□□□□ -1.54
Chmp2aQ9DB34 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Gm2199-201ENSMUST00000119065 874 ntBASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Gm12281-201ENSMUST00000119536 298 ntBASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Gm11804-201ENSMUST00000121663 468 ntBASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Gm24860-201ENSMUST00000158457 276 ntBASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Gm17907-201ENSMUST00000173150 710 ntBASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Mir3110-201ENSMUST00000175053 80 ntBASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Gm22698-201ENSMUST00000175375 108 ntBASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Gm21909-201ENSMUST00000178260 439 ntBASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Mir6412-201ENSMUST00000184477 97 ntBASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Mir6400-201ENSMUST00000184870 92 ntBASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Gm37215-201ENSMUST00000194927 1259 ntBASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Gm42542-201ENSMUST00000197978 268 ntBASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Mir337-201ENSMUST00000083592 97 ntBASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Gm9386-201ENSMUST00000095195 381 ntBASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.45□□□□□ -1.54
Chmp2aQ9DB34 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Chmp2aQ9DB34 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.44□□□□□ -1.54
Chmp2aQ9DB34 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.44□□□□□ -1.54
Chmp2aQ9DB34 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.44□□□□□ -1.54
Chmp2aQ9DB34 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Chmp2aQ9DB34 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.44□□□□□ -1.54
Chmp2aQ9DB34 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Chmp2aQ9DB34 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
Chmp2aQ9DB34 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Chmp2aQ9DB34 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Chmp2aQ9DB34 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Chmp2aQ9DB34 Gm26300-201ENSMUST00000102282 94 ntBASIC5.44□□□□□ -1.54
Chmp2aQ9DB34 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Chmp2aQ9DB34 Gm25919-201ENSMUST00000104271 132 ntBASIC5.44□□□□□ -1.54
Chmp2aQ9DB34 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Chmp2aQ9DB34 Gm7206-201ENSMUST00000117730 508 ntBASIC5.44□□□□□ -1.54
Chmp2aQ9DB34 Gm11805-201ENSMUST00000121238 600 ntBASIC5.44□□□□□ -1.54
Chmp2aQ9DB34 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.44□□□□□ -1.54
Chmp2aQ9DB34 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC5.44□□□□□ -1.54
Chmp2aQ9DB34 Gm11197-201ENSMUST00000145158 839 ntBASIC5.44□□□□□ -1.54
Chmp2aQ9DB34 Gm25906-201ENSMUST00000158489 126 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms