Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm45215-201ENSMUST00000206407 395 ntBASIC4.73□□□□□ -1.65
Scrt1Q99M85 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC4.73□□□□□ -1.65
Scrt1Q99M85 Gm18127-201ENSMUST00000208479 725 ntBASIC4.73□□□□□ -1.65
Scrt1Q99M85 Gm45908-201ENSMUST00000212977 1177 ntBASIC4.73□□□□□ -1.65
Scrt1Q99M85 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Scrt1Q99M85 Gm32526-201ENSMUST00000221878 981 ntBASIC4.73□□□□□ -1.65
Scrt1Q99M85 AC160980.2-201ENSMUST00000225131 949 ntBASIC4.73□□□□□ -1.65
Scrt1Q99M85 AC131117.2-203ENSMUST00000225886 950 ntBASIC4.73□□□□□ -1.65
Scrt1Q99M85 AC133517.2-201ENSMUST00000226820 690 ntBASIC4.73□□□□□ -1.65
Scrt1Q99M85 Gm4963-201ENSMUST00000072718 378 ntBASIC4.73□□□□□ -1.65
Scrt1Q99M85 Snord59a-201ENSMUST00000082844 74 ntBASIC4.73□□□□□ -1.65
Scrt1Q99M85 Mir17-201ENSMUST00000083574 84 ntBASIC4.73□□□□□ -1.65
Scrt1Q99M85 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Scrt1Q99M85 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Scrt1Q99M85 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Scrt1Q99M85 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Scrt1Q99M85 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC4.73□□□□□ -1.65
Scrt1Q99M85 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Scrt1Q99M85 Gm37249-201ENSMUST00000195185 2869 ntBASIC4.73□□□□□ -1.65
Scrt1Q99M85 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Scrt1Q99M85 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Scrt1Q99M85 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Scrt1Q99M85 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Scrt1Q99M85 Gm42503-201ENSMUST00000199080 3706 ntBASIC4.73□□□□□ -1.65
Scrt1Q99M85 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Scrt1Q99M85 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Scrt1Q99M85 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Gm11774-201ENSMUST00000118601 293 ntBASIC4.72□□□□□ -1.65
Scrt1Q99M85 Gm7973-201ENSMUST00000122107 488 ntBASIC4.72□□□□□ -1.65
Scrt1Q99M85 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Gm22411-201ENSMUST00000175462 126 ntBASIC4.72□□□□□ -1.65
Scrt1Q99M85 Gm22002-201ENSMUST00000175622 125 ntBASIC4.72□□□□□ -1.65
Scrt1Q99M85 Mir7012-201ENSMUST00000183900 64 ntBASIC4.72□□□□□ -1.65
Scrt1Q99M85 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Ighv3-2-201ENSMUST00000191842 349 ntBASIC4.72□□□□□ -1.65
Scrt1Q99M85 Gm37503-201ENSMUST00000192088 319 ntBASIC4.72□□□□□ -1.65
Scrt1Q99M85 Gm2367-201ENSMUST00000192374 472 ntBASIC4.72□□□□□ -1.65
Scrt1Q99M85 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Gm44281-201ENSMUST00000203090 166 ntBASIC4.72□□□□□ -1.65
Scrt1Q99M85 Clec2j-202ENSMUST00000203658 606 ntBASIC4.72□□□□□ -1.65
Scrt1Q99M85 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Gm45608-201ENSMUST00000210948 389 ntBASIC4.72□□□□□ -1.65
Scrt1Q99M85 Gm2607-201ENSMUST00000212389 627 ntBASIC4.72□□□□□ -1.65
Scrt1Q99M85 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC4.72□□□□□ -1.65
Scrt1Q99M85 AC121986.1-201ENSMUST00000218588 781 ntBASIC4.72□□□□□ -1.65
Scrt1Q99M85 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Gm7887-201ENSMUST00000056948 537 ntBASIC4.72□□□□□ -1.65
Scrt1Q99M85 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC4.72□□□□□ -1.65
Scrt1Q99M85 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Scrt1Q99M85 LOC102637012-201ENSMUST00000217248 2562 ntBASIC4.72□□□□□ -1.65
Scrt1Q99M85 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Scrt1Q99M85 Gm38190-201ENSMUST00000192350 4755 ntBASIC4.72□□□□□ -1.65
Scrt1Q99M85 Gm18719-201ENSMUST00000196696 1413 ntBASIC4.72□□□□□ -1.65
Scrt1Q99M85 Gm37589-201ENSMUST00000193609 3994 ntBASIC4.72□□□□□ -1.65
Scrt1Q99M85 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Scrt1Q99M85 Gm42702-201ENSMUST00000199515 4217 ntBASIC4.71□□□□□ -1.65
Scrt1Q99M85 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.65
Scrt1Q99M85 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
Scrt1Q99M85 Gm37606-201ENSMUST00000191816 3116 ntBASIC4.71□□□□□ -1.66
Scrt1Q99M85 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Scrt1Q99M85 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Scrt1Q99M85 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC4.71□□□□□ -1.66
Scrt1Q99M85 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
Scrt1Q99M85 Gm24117-201ENSMUST00000103973 133 ntBASIC4.71□□□□□ -1.66
Scrt1Q99M85 Gm24469-201ENSMUST00000104487 131 ntBASIC4.71□□□□□ -1.66
Scrt1Q99M85 Gm23879-201ENSMUST00000116874 126 ntBASIC4.71□□□□□ -1.66
Scrt1Q99M85 Gm12131-201ENSMUST00000117479 359 ntBASIC4.71□□□□□ -1.66
Scrt1Q99M85 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC4.71□□□□□ -1.66
Scrt1Q99M85 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC4.71□□□□□ -1.66
Scrt1Q99M85 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Scrt1Q99M85 Gm25179-201ENSMUST00000122632 128 ntBASIC4.71□□□□□ -1.66
Scrt1Q99M85 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC4.71□□□□□ -1.66
Scrt1Q99M85 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.71□□□□□ -1.66
Scrt1Q99M85 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.71□□□□□ -1.66
Scrt1Q99M85 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC4.71□□□□□ -1.66
Scrt1Q99M85 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC4.71□□□□□ -1.66
Scrt1Q99M85 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms