Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trex1Q91XB0 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Trex1Q91XB0 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trex1Q91XB0 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trex1Q91XB0 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.3□□□□□ -1.4
Trex1Q91XB0 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trex1Q91XB0 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trex1Q91XB0 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trex1Q91XB0 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trex1Q91XB0 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Trex1Q91XB0 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trex1Q91XB0 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC6.29□□□□□ -1.4
Trex1Q91XB0 Gm25109-201ENSMUST00000122474 114 ntBASIC6.29□□□□□ -1.4
Trex1Q91XB0 Gm25176-201ENSMUST00000122640 125 ntBASIC6.29□□□□□ -1.4
Trex1Q91XB0 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Gm23965-201ENSMUST00000157969 142 ntBASIC6.29□□□□□ -1.4
Trex1Q91XB0 Gm24854-201ENSMUST00000158025 98 ntBASIC6.29□□□□□ -1.4
Trex1Q91XB0 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Mir6398-201ENSMUST00000184541 102 ntBASIC6.29□□□□□ -1.4
Trex1Q91XB0 Gm27148-201ENSMUST00000185086 160 ntBASIC6.29□□□□□ -1.4
Trex1Q91XB0 Gm37738-201ENSMUST00000192396 4716 ntBASIC6.29□□□□□ -1.4
Trex1Q91XB0 Gm37303-201ENSMUST00000194202 1559 ntBASIC6.29□□□□□ -1.4
Trex1Q91XB0 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Gm43631-201ENSMUST00000202011 369 ntBASIC6.29□□□□□ -1.4
Trex1Q91XB0 Gm45008-201ENSMUST00000206420 493 ntBASIC6.29□□□□□ -1.4
Trex1Q91XB0 Gm45156-201ENSMUST00000207255 439 ntBASIC6.29□□□□□ -1.4
Trex1Q91XB0 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Gm44845-201ENSMUST00000208773 335 ntBASIC6.29□□□□□ -1.4
Trex1Q91XB0 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC6.29□□□□□ -1.4
Trex1Q91XB0 AC159819.1-201ENSMUST00000213911 328 ntBASIC6.29□□□□□ -1.4
Trex1Q91XB0 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC6.29□□□□□ -1.4
Trex1Q91XB0 AC155808.1-201ENSMUST00000219288 409 ntBASIC6.29□□□□□ -1.4
Trex1Q91XB0 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC6.29□□□□□ -1.4
Trex1Q91XB0 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trex1Q91XB0 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6.29□□□□□ -1.4
Trex1Q91XB0 AC131743.3-201ENSMUST00000222099 662 ntBASIC6.29□□□□□ -1.4
Trex1Q91XB0 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trex1Q91XB0 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trex1Q91XB0 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.28□□□□□ -1.4
Trex1Q91XB0 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trex1Q91XB0 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.28□□□□□ -1.4
Trex1Q91XB0 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.28□□□□□ -1.4
Trex1Q91XB0 Gm43210-201ENSMUST00000196743 6152 ntBASIC6.28□□□□□ -1.4
Trex1Q91XB0 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trex1Q91XB0 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Trex1Q91XB0 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trex1Q91XB0 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trex1Q91XB0 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trex1Q91XB0 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trex1Q91XB0 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trex1Q91XB0 Gm24429-201ENSMUST00000104076 132 ntBASIC6.28□□□□□ -1.4
Trex1Q91XB0 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
Trex1Q91XB0 H3f3c-201ENSMUST00000119459 411 ntBASIC6.28□□□□□ -1.4
Trex1Q91XB0 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trex1Q91XB0 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trex1Q91XB0 Gm25383-201ENSMUST00000157810 144 ntBASIC6.28□□□□□ -1.4
Trex1Q91XB0 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC6.28□□□□□ -1.4
Trex1Q91XB0 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trex1Q91XB0 Gm22355-201ENSMUST00000175531 96 ntBASIC6.28□□□□□ -1.4
Trex1Q91XB0 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Trex1Q91XB0 Gm18728-201ENSMUST00000186155 753 ntBASIC6.28□□□□□ -1.4
Trex1Q91XB0 Trbv28-201ENSMUST00000192804 264 ntBASIC6.28□□□□□ -1.4
Trex1Q91XB0 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC6.28□□□□□ -1.4
Trex1Q91XB0 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC6.28□□□□□ -1.4
Trex1Q91XB0 Gm21041-201ENSMUST00000214829 823 ntBASIC6.28□□□□□ -1.4
Trex1Q91XB0 AC153840.1-201ENSMUST00000219685 313 ntBASIC6.28□□□□□ -1.4
Trex1Q91XB0 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trex1Q91XB0 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC6.28□□□□□ -1.4
Trex1Q91XB0 AC153153.2-201ENSMUST00000223572 411 ntBASIC6.28□□□□□ -1.4
Trex1Q91XB0 AC161609.1-201ENSMUST00000225878 474 ntBASIC6.28□□□□□ -1.4
Trex1Q91XB0 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trex1Q91XB0 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trex1Q91XB0 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC6.28□□□□□ -1.4
Trex1Q91XB0 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms