Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Gm11584-201ENSMUST00000120636 325 ntBASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Gm22958-201ENSMUST00000122512 184 ntBASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Trbv27-201ENSMUST00000193711 277 ntBASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 AC099760.1-201ENSMUST00000196300 153 ntBASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Gm44374-201ENSMUST00000199821 140 ntBASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Gm43772-201ENSMUST00000202052 379 ntBASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 AC132384.6-201ENSMUST00000218976 1206 ntBASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Gm44250-201ENSMUST00000203092 4229 ntBASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Gm43216-201ENSMUST00000196295 1333 ntBASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 AC160130.1-201ENSMUST00000220734 2735 ntBASIC6.48□□□□□ -1.37
Ccdc9Q8VC31 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Gm36936-201ENSMUST00000194508 2749 ntBASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Mir466f-2-201ENSMUST00000104805 94 ntBASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Gm13669-201ENSMUST00000122366 457 ntBASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Gm25843-201ENSMUST00000122582 314 ntBASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Gm25295-201ENSMUST00000122794 306 ntBASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Gm25660-201ENSMUST00000158470 104 ntBASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Gm29036-201ENSMUST00000189967 877 ntBASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Gm37024-201ENSMUST00000192224 868 ntBASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Gm37845-201ENSMUST00000194977 355 ntBASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Gm8920-201ENSMUST00000196153 924 ntBASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Gm44038-201ENSMUST00000203952 889 ntBASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Gm44214-201ENSMUST00000204153 606 ntBASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Gm45498-201ENSMUST00000210346 283 ntBASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Gm24032-201ENSMUST00000083932 159 ntBASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Gm37393-201ENSMUST00000195118 3870 ntBASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc9Q8VC31 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.37
Ccdc9Q8VC31 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
Ccdc9Q8VC31 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc9Q8VC31 Gm22714-201ENSMUST00000116894 78 ntBASIC6.46□□□□□ -1.38
Ccdc9Q8VC31 Gm12073-201ENSMUST00000117382 524 ntBASIC6.46□□□□□ -1.38
Ccdc9Q8VC31 Gm14018-201ENSMUST00000119042 455 ntBASIC6.46□□□□□ -1.38
Ccdc9Q8VC31 Gm14938-201ENSMUST00000119482 943 ntBASIC6.46□□□□□ -1.38
Ccdc9Q8VC31 Gm14054-201ENSMUST00000120744 704 ntBASIC6.46□□□□□ -1.38
Ccdc9Q8VC31 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC6.46□□□□□ -1.38
Ccdc9Q8VC31 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc9Q8VC31 Gm22383-201ENSMUST00000158188 327 ntBASIC6.46□□□□□ -1.38
Ccdc9Q8VC31 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc9Q8VC31 Gm8902-201ENSMUST00000174341 1096 ntBASIC6.46□□□□□ -1.38
Ccdc9Q8VC31 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 102.6 ms