Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
Vps53Q8CCB4 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Gm37589-201ENSMUST00000193609 3994 ntBASIC6.51□□□□□ -1.37
Vps53Q8CCB4 AC164092.3-201ENSMUST00000216970 1323 ntBASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Gm4011-201ENSMUST00000174657 2555 ntBASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Gm13579-201ENSMUST00000118519 517 ntBASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Gm16179-201ENSMUST00000120685 373 ntBASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Gm22106-201ENSMUST00000122544 127 ntBASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Gm25318-201ENSMUST00000122554 314 ntBASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Gm23467-201ENSMUST00000157127 159 ntBASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Gm24363-201ENSMUST00000158440 311 ntBASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Gm7335-201ENSMUST00000172475 373 ntBASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Gm18343-201ENSMUST00000172802 604 ntBASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Gm22917-201ENSMUST00000180116 110 ntBASIC6.51□□□□□ -1.37
Vps53Q8CCB4 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Gm37576-201ENSMUST00000194228 372 ntBASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 AC123835.1-201ENSMUST00000214362 670 ntBASIC6.51□□□□□ -1.37
Vps53Q8CCB4 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 AC170999.2-201ENSMUST00000226223 264 ntBASIC6.51□□□□□ -1.37
Vps53Q8CCB4 AC154484.2-201ENSMUST00000228359 818 ntBASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 n-R5s215-201ENSMUST00000082480 104 ntBASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Gm18853-201ENSMUST00000183629 3596 ntBASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Gm44144-201ENSMUST00000203683 1960 ntBASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Vps53Q8CCB4 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Vps53Q8CCB4 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Lipe-203ENSMUST00000105177 1251 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Gm16205-201ENSMUST00000117720 1027 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Gm11866-201ENSMUST00000120209 335 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Gm11350-201ENSMUST00000121436 870 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Gm12998-201ENSMUST00000122445 789 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Gm16359-201ENSMUST00000124511 289 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Gm25271-201ENSMUST00000157273 290 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Mir3062-201ENSMUST00000174986 105 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Gm22852-201ENSMUST00000177899 101 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Gm8321-201ENSMUST00000181691 980 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Gm4832-201ENSMUST00000182679 399 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Gm37599-201ENSMUST00000193067 489 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Gm18325-201ENSMUST00000203228 835 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Gm20074-201ENSMUST00000208144 484 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Gm20946-201ENSMUST00000212367 461 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC6.5□□□□□ -1.37
Vps53Q8CCB4 AC124445.1-201ENSMUST00000218613 452 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Vps53Q8CCB4 AC161884.2-201ENSMUST00000224513 227 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 AC141425.1-201ENSMUST00000224989 265 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Gm5087-204ENSMUST00000225820 645 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 AC133203.2-201ENSMUST00000226709 464 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 AC122035.2-201ENSMUST00000228698 462 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
Vps53Q8CCB4 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Gm38137-201ENSMUST00000193735 1401 ntBASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Vps53Q8CCB4 Gm37846-201ENSMUST00000191840 3774 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms