Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm43335-201ENSMUST00000198299 3276 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 CT025566.1-202ENSMUST00000224800 2511 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm43421-201ENSMUST00000200044 2905 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm14510-201ENSMUST00000116165 1092 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm14909-201ENSMUST00000117853 351 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm12447-201ENSMUST00000119110 470 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm12101-201ENSMUST00000121590 390 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm15075-201ENSMUST00000122187 477 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm3810-201ENSMUST00000122413 476 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm15946-201ENSMUST00000160654 423 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm17030-201ENSMUST00000167016 393 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm20530-201ENSMUST00000174261 254 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Mir7046-201ENSMUST00000183435 66 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm27152-201ENSMUST00000183828 99 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm27295-201ENSMUST00000184264 153 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm27299-201ENSMUST00000184593 103 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm42708-201ENSMUST00000196332 905 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm3148-201ENSMUST00000203594 612 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm44149-201ENSMUST00000204256 226 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm5322-201ENSMUST00000206142 699 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm45626-201ENSMUST00000210093 361 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm7351-201ENSMUST00000210745 580 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 AL671874.1-201ENSMUST00000223746 1123 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm43662-201ENSMUST00000198310 2271 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Gm15930-201ENSMUST00000156603 2037 ntBASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Trim47Q8C0E3 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm18954-201ENSMUST00000222200 1792 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 AC153143.2-201ENSMUST00000220999 1804 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm44620-201ENSMUST00000209183 2887 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm22267-201ENSMUST00000104008 131 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm22284-201ENSMUST00000104132 132 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm13265-201ENSMUST00000118090 421 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm15149-201ENSMUST00000119370 360 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm12807-201ENSMUST00000121546 962 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm25781-201ENSMUST00000122527 84 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm14747-201ENSMUST00000149888 984 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm24729-201ENSMUST00000158225 137 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm25898-201ENSMUST00000158303 106 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm6726-201ENSMUST00000172786 681 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm28023-201ENSMUST00000184556 60 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm27825-201ENSMUST00000184586 60 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm3933-201ENSMUST00000195391 439 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm44162-201ENSMUST00000203543 544 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm18838-201ENSMUST00000204855 886 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm7890-201ENSMUST00000204877 601 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm44794-201ENSMUST00000206550 411 ntBASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC7.43□□□□□ -1.22
Trim47Q8C0E3 Olfr923-204ENSMUST00000219798 1068 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms