Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm10650-202ENSMUST00000196581 1969 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 AC174797.3-203ENSMUST00000225749 2078 ntBASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdh19Q80TF3 Gm42728-201ENSMUST00000202644 1552 ntBASIC6.52□□□□□ -1.36
Pcdh19Q80TF3 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Mir466n-201ENSMUST00000104798 94 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm12077-201ENSMUST00000117049 364 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm8534-201ENSMUST00000118553 766 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm25559-201ENSMUST00000157182 74 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm24781-201ENSMUST00000157636 117 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm6061-201ENSMUST00000175860 492 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm9457-201ENSMUST00000180176 372 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Rps12l1-201ENSMUST00000183090 399 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm27636-201ENSMUST00000184528 122 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm37715-201ENSMUST00000193206 235 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm37191-201ENSMUST00000193346 388 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm37209-201ENSMUST00000194109 1276 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm44225-201ENSMUST00000203582 186 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm44718-201ENSMUST00000206886 359 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm5324-201ENSMUST00000208115 476 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 AC132384.5-201ENSMUST00000218562 226 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 AC140288.1-201ENSMUST00000226329 503 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdh19Q80TF3 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms